3D Structure for uvig_46527_CDS_0039 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 86.74 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_46527_CDS_0039 1 AcrIE6 0.74 View Alignment uvig_46527_CDS_0039 M -N R -Y E I D K K ---L S S L Y K E L -E Q -V E M A N E L T A -C I -L C N T D T K Q E A I E T I Q Q E I D Y Y (60)
M N ++ L EL + + E+ + I +
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D -R L -P T L E I --L --S -P M Y T A V M V T Y D L I G K Q L A S R
uvig_46527_CDS_0039 E G Q L K -E I E E Y E N R E T N Y E R T A D K P Y L C W (89)
L +EE + ++
AcrIE6 R A E L I E I L E E Q Y P G H A A -D L S I K -N L C -P
uvig_46527_CDS_0039 2 AcrIE1 0.58 View Alignment uvig_46527_CDS_0039 M --N ----R -Y -E -I -D ----K K ----------L S -S -L -Y K ----E L E Q V E M A N E L T A -(60)
M +K + +E++ A
AcrIE1 M E K K L S D A -Q -V -A -L -V A A W R K Y P D L R E S L E E A A S -I -L -S L I V F Q A E T L S D Q A N E L A N
uvig_46527_CDS_0039 C I L C -N T D T K Q E A I E T I Q Q E I D Y Y E G Q L K E -I -E E -Y -E N R E T N Y E R T A D K P Y L C W (116)
I + A +I Y +D
AcrIE1 Y I R R Q G L E E A E G A C R N I D I M R A K W V E V C G -E -V N -Q -H G I --R V Y G D A I D -R D -V D
uvig_46527_CDS_0039 3 AcrIIC4 0.57 View Alignment uvig_46527_CDS_0039 M -N -R Y E I D ----------K K -----------L S S L Y K E L -E Q V E M A N E L T A C I L C N T -D (60)
M K + L K + EQ A +
AcrIIC4 M K I T S S N F -A T I A T S E N F A K -L S V L P K N H R E P I K G L F K S A V E Q F S S A R D F F K ---N E -N -
uvig_46527_CDS_0039 -T K Q E A I -E T I Q Q E I D Y Y E G Q L K E I E -E Y E N R E T N Y E R T A -D K P Y L C W (108)
E++ + L + A +
AcrIIC4 Y -S K E L A E K F N K E A V N E A V E K L Q K A I D -L ----------A E K Q G I Q -F
uvig_46527_CDS_0039 4 AcrIF23 0.55 View Alignment uvig_46527_CDS_0039 M -N R Y E I -D ------K K -------------L S ----------------------------(60)
M N D
AcrIF23 M T N F Q T W L D S A D I P V Q -Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
uvig_46527_CDS_0039 ------------S L ----Y K E L E Q -V E M -A N E L T A ----C I L C N T D -T K Q -E A I E -T -I Q (120)
E Q + A +L
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E K V Q Q M -N Q D Q A E M A C D P S G L L T A A K F -W I E N R -N D -S -A
uvig_46527_CDS_0039 Q E I D Y ----Y -E -G -Q -L -K -E -I -E -E -Y -E N R -E ----T ----N -Y E R T A D K -P Y -L C (180)
QEI Y
AcrIF23 Q E I A G F V M Q -Q -K -A -L -L -A -Q -H -R -S -A K A A G Q A D K V A K I A A -E Y ---N A L T A -R W G
uvig_46527_CDS_0039 W (181)
+
AcrIF23 F
uvig_46527_CDS_0039 5 AcrIF2-IC2 0.55 View Alignment uvig_46527_CDS_0039 M N ---R Y E I D K K L S S L Y K E L E Q ---V E M A N E ----L --T A C I -L -C -N T D -T K Q ---E A I (60)
M I E + A + +
AcrIF2-IC2 M A T K T A Q M I A Q Q H K D T V A A C E A A E A I A I A K D Q V W D -G E G -Y T K Y T F D D N S V -L I Q S G T T Q
uvig_46527_CDS_0039 E -T I -Q Q E I D Y Y E G Q L K E I E E Y E N R E -T -N -Y E R T -A D K -P -Y -L C W (107)
++D G + +++ ER ++
AcrIF2-IC2 Y A M -D A D D A D S I K G Y A D W L D D E A R S A E A S -E I E R -L L E -S -V -E E -E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;