3D Structure for uvig_456738_CDS_0029 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.15 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_456738_CDS_0029 1 AcrIE6 0.70 View Alignment uvig_456738_CDS_0029 M E L T K K D K R H I E E E V R K L Q F R I G A E S R E Y A R L Y -----E -K ----T Y L E V L K K E I S G R I A (60)
M D +E ++ + L +++ K + R A
AcrIE6 M N N ---D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M -Y -T A V M V T Y D L I G K Q L A S R R A
uvig_456738_CDS_0029 A I E -Q Y N N A M L K I S E P -T K ---T E (84)
+ +
AcrIE6 E L I E I L E E Q Y P G H A A D L S I K N L C P
uvig_456738_CDS_0029 2 AcrIE1 0.65 View Alignment uvig_456738_CDS_0029 M -E L ---T K ----K -D -K --------R -H -I -E -E -E --------V -R -K L Q F -R I G -A E (60)
M +
AcrIE1 M E K K L S D A Q V A L V -A -A -W R K Y P D L R -E -S -L -E -E -A A S I L S L I -V -F -Q A E T -L S D -Q
uvig_456738_CDS_0029 S R ----E -Y A -R -L Y E K T Y L E V ---L -K K -E -I -S G R I A A I E Q Y N N A M L K I S E P T -K -T -(120)
+E + + N+ +++
AcrIE1 A N E L A N -Y I -R -R -Q G L E E A E G A C R N I -D I -M -R A K W V E V C G E V N Q H G I R V Y G D A I D R D V
uvig_456738_CDS_0029 E (121)
+
AcrIE1 D
uvig_456738_CDS_0029 3 AcrIF23 0.61 View Alignment uvig_456738_CDS_0029 M E L ---T -K K --D ---------K ----R --------------------------------(60)
M
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
uvig_456738_CDS_0029 -----------H -I -E -E -E -V R K L Q F R I G A E S R E Y A R L Y ---E K --------T -Y L E -- (120)
++ E A
AcrIF23 G R A L T G T A R Q K E W -A -E -K -I R A E K V Q Q M N Q D Q A E M A -C D P S G L L T A A K F W I E -N -R N D S
uvig_456738_CDS_0029 --V -L -K K -E -I S -G -R I A -A -I E -Q -Y N N ---------A -M -L -K I ----S E P T K -T -- (180)
K
AcrIF23 A Q -E -I -A G -F -V M -Q -Q K A -L -L A -Q H R -S A K A A G Q A D -K -V -A K -I A A E Y N A L T A R W G
uvig_456738_CDS_0029 E (181)
AcrIF23 F
uvig_456738_CDS_0029 4 AcrIC3 0.58 View Alignment uvig_456738_CDS_0029 M -E L -T K K D ---------K R H I E ---E -------E V R -K -L Q F ---R I -G A E -S R E Y A R L (60)
M T + + A +R +
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S S G Q V K F M A D K T D R -G -L E S R F L V P E A -G N R R I E V A
uvig_456738_CDS_0029 Y E K ----T Y L E V L K K E I S -G R I A A I E Q ----Y -N N A -M L K I -S E P T K T E (109)
+ +L E+ + A + +
AcrIC3 L T G R D L E -A A N A L F S E L A A -S V E A T N E M Y R E -L D A -E R A Q -I N K -A L E G
uvig_456738_CDS_0029 5 AcrIIC4 0.56 View Alignment uvig_456738_CDS_0029 M E L T K K D ---K R ---------H I E ----E E V R K L Q F R I G A E S R E Y A R -L Y -E K T Y L E -V L (60)
M +T + E ++ L + E Y ++
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N -Y S K E L A
uvig_456738_CDS_0029 K K E I S -G R -I A A I E Q Y N -N A M L -K I S E P T -K T E (93)
K A+E + E + +
AcrIIC4 E K F N K E A -V N E A V E K L -Q K -A I D L -A E K Q G I Q F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;