3D Structure for uvig_453621_CDS_0001 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 86.06 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_453621_CDS_0001 1 AcrIIA21 0.87 View Alignment uvig_453621_CDS_0001 M T N T I Y I H Q P E K A V S F T R L P N F L F E A P T F T P L S N E A K V L Y A F I L R R T D L S R K N G W A D E Y G (60)
M +P L + LS ++YA + R+ GW+D G
AcrIIA21 M D -Y --D ------N E N Y L I P K I L L Q D D F Y S S L S A K D I L V Y A V L K D R Q I E A L E K G W I D T D G
uvig_453621_CDS_0001 R I Y L Y Y P I N E V V E L L H C G R Q K A V N T L R E L Q Y A G L V E I Q K Q G C G K P N R I Y P K S Y E A V P N T D (120)
IYL + E++ C R+ + L + L+E +
AcrIIA21 S I Y L N F K L I E L A K M F S C S R T T M I D V M Q R L E E V N L I E R E R V -D -V F Y G Y S L P Y K -T ----Y
uvig_453621_CDS_0001 F K K S G Y G T P E D (131)
E
AcrIIA21 -----I N --E V
uvig_453621_CDS_0001 2 AcrIA3 0.48 View Alignment uvig_453621_CDS_0001 M T N T I Y I H Q P E K A V S F T R L P N F -L F E A P T F T P L S N E A K V L Y A F I L R R T D L S R K N G W A -D E (60)
M+ I K E L + K L + E
AcrIA3 M S F Y I -M --Y I K ---V K E ----M -S E Q K -Q I S L R S K Q K E L L Q R F F E I A E ---V ----D -E
uvig_453621_CDS_0001 Y G R I Y L -Y -Y P I N E V V E -L L -H C G R Q K A V N T L R E L Q Y A G L ---V E I Q K Q G C -G -K P N R I Y (120)
G + + ++ R Q + + K K ++
AcrIA3 N G D L C I P L Y D S S G D L T -L -F K Q -------D -S R K Y Q M Y A Y F R I L R L I K K Q I F F I K V K K V K
uvig_453621_CDS_0001 -P K -S Y E -A -V P N T D F K K S G Y G T P E D (146)
++ E
AcrIA3 R D -K K F L C -M -H S N V I D Q -V K S V L E S
uvig_453621_CDS_0001 3 AcrVA2 0.44 View Alignment uvig_453621_CDS_0001 M T N --T I Y ---I H Q P E ----K ------------A V --S F ---------------------(60)
M +
AcrVA2 M H H T I A R M N A F N K A F A N A K D -C Y K K M Q A W H L L N K P K H A -F F P M Q N T P A L D N G L A A L Y E L R
uvig_453621_CDS_0001 --------------------------------------T ------------R L P N F L F E - (120)
LP +
AcrVA2 G G K E D A H I L S I L S R L Y L Y G A W R N T L G I Y Q L D E E I I K D C K E L P D D T P T S I F L N L P D W C V Y V
uvig_453621_CDS_0001 ---A P T F T P -L ------S N E A K V L ---Y ------A F I L R R T D L S -R -K N G W A D E Y G R I Y - (180)
+ ++ +L + +
AcrVA2 D I S S A Q I A T F D D G V A K H I K G F W A I Y D I V E M N G I N H D V L D F V V D T D -T -D D N V -Y V P Q P -F
uvig_453621_CDS_0001 L -Y Y P I N E V V E L L H C ---G R --Q K A V -N T L R E L Q Y --------A ------G L -V E I -Q K -(240)
+ V+E+L + ++ L G
AcrVA2 -I L S S G Q S V A E V L D Y G A S L F D D D T S -N T L I K G L L P Y L L W L C V A E P D I T Y K G -L P V -S R -E
uvig_453621_CDS_0001 Q G --------C -G K P -N R I Y -P K S --------Y ------------E -A -V ----------(300)
+ P +
AcrVA2 -E L T R P K H S I N K K -T G A F V -T P S E P F I Y Q I G E R L G S E V R R Y Q S I I D G E Q -K R N R P H T K R P
uvig_453621_CDS_0001 -----------------P ------N T -D -F K K S G Y G T -P E D (341)
+ F +
AcrVA2 H I R R G H W H G Y W Q G T G Q A K E F R V R W Q P A -V F V -N S G -R V S -S
uvig_453621_CDS_0001 4 AcrIE5 0.38 View Alignment uvig_453621_CDS_0001 M T N T I Y I H Q P E K A V -S F T R L P -N F L F E A P T F T P L S N E A K V L Y A F I L R R T D L S R K N G W A D E (60)
M+
AcrIE5 M S ---N D -----R N G -I I N Q I I D Y T -----------------------------------
uvig_453621_CDS_0001 Y G R I Y L Y Y P I N E V V E L L H C G R Q K A V N T L R E L Q Y A G L V E I Q K Q G C G K P N R I Y P K S Y E A V P N (120)
R +A EL + + + + + V
AcrIE5 ---------G --------T D R D H A E R I Y E E L R A D D R I Y F D D S V G L D R Q G L L I R E D --V --
uvig_453621_CDS_0001 T D F K K S G Y G T P E D (133)
D +
AcrIE5 -D L M -A V A A E I -E
uvig_453621_CDS_0001 5 AcrIIA6 0.38 View Alignment uvig_453621_CDS_0001 M T N -T I -Y I H Q P E K ---A ----V -S F ------T R L P N -F L F E A ----P T F T P -L ---S N E (60)
M E + + T
AcrIIA6 M K I N D D I K E L I L E Y M S R Y F K F E -N D -F Y K L P G I K F T D A N -W Q K F K N G -G -T D I E K M G A A R
uvig_453621_CDS_0001 A K V L Y A F I L R ----R -T -D -L S -R -K N G W A D E Y G R I Y L ---------Y -Y P I N E V V E L L H (120)
+ + + + + + ++ L+
AcrIIA6 V N A M L D C L F D D F E L -A -M -I -G K A Q -T N Y Y N -D N S L K M N M P F Y T Y Y D -M F K K Q Q L L K W L K
uvig_453621_CDS_0001 C G R Q K A V N T L R -E L Q -Y -------A G L V E I -Q K -Q -G C G K -P N R I Y -P K S Y -E A V -----(180)
R ++ +E+ + G + +
AcrIIA6 N N R D D V I G G T G R M -Y T -A S G N Y I A N A Y L E V A L -E S S S L G S G S Y M L -Q -M R F K D Y S K G Q E P
uvig_453621_CDS_0001 P N -T D -F K K S G ---Y G T -P -E D (202)
+
AcrIIA6 I -P -S G R Q N R L E W I E N N L E N I R
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;