3D Structure for uvig_448189_CDS_0004 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 90.19 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_448189_CDS_0004 1 AcrIIA21 0.88 View Alignment uvig_448189_CDS_0004 M K Q E F C K F T V E S L S A S Y I P F P R F L M E D -C F A G L T N D A K V L Y A L M L D R A S I S K V N G Y I D S D (60)
M P+ L D L+ ++YA+ DR G ID+D
AcrIIA21 M D --Y --D ------N E N Y L I P K I L L Q D D F Y S S L S A K D I L V Y A V L K D R Q I E A L E K G W I D T D
uvig_448189_CDS_0004 G T I R L Y F T V E Q A Q K K L H R S R Q S V T R I F Q Q L E C S G L I C R R K Q G L G K P A M I T -L N Y P S D A K L (120)
G+I L F + + K SR++ + Q LE LI R + + P
AcrIIA21 G S I Y L N F K L I E L A K M F S C S R T T M I D V M Q R L E E V N L I E R E R V -D -V F Y G --Y -S L P Y K -T Y
uvig_448189_CDS_0004 I Q P K E D S -A K P S G (133)
AcrIIA21 --I ----N --E -V
uvig_448189_CDS_0004 2 AcrIA3 0.48 View Alignment uvig_448189_CDS_0004 M K Q E F C K F T V E S L S A S Y I -P F P R F L -M -E -D C F A G L T N D A K V L Y A L M L D R A S I S K V N G Y I (60)
M + L + K L + A +
AcrIA3 M S F Y I -M ---Y I K ---V K E ----M -S -E -Q -K Q I S L R S K Q K E L L Q R F F E I A E V -D -----
uvig_448189_CDS_0004 D -S D G T I R L -Y -F T V E Q A Q K K L H ---R --S R -Q S V T R I F Q Q L E C -S -G L I C R R K Q G L G K P (120)
G + + + ++ + RI + + I +K
AcrIA3 -E -N G D L C I P L Y D S S G D L T L F K Q D S R -K Y Q -M Y A Y F R I L R L I K -K Q I F F I K V K K -V K R D K
uvig_448189_CDS_0004 A M I T L N Y P S D A K L I Q -P -K -E D S A K P S G (148)
+
AcrIA3 K F L C M H S N V I D ----Q -V -K -S V --L E S
uvig_448189_CDS_0004 3 AcrIE5 0.39 View Alignment uvig_448189_CDS_0004 M K Q E F C K F T V E S -L S -A -S Y I P F P R F L M E D C F A G L T N D A K V L Y A L M L D R A S I S K V N G Y I D (60)
M I
AcrIE5 M S --------N -D -R N -G -I I N Q I I D Y T --------------------------------
uvig_448189_CDS_0004 S D G T I R L Y F T V E Q A Q K K L H R S R Q S V T R I F Q Q L E C S G L I C R R K Q G L G K P A M I T L N Y P S D A K (120)
R + RI L I + + +
AcrIE5 --------G ----------T D R D H A E R I Y E E L R A D D R I Y F D D S V G L D R Q G L L I R E D V --D
uvig_448189_CDS_0004 L I Q P K E D -S A K -P S G (135)
L A
AcrIE5 L M ---A -V A A -E -I E
uvig_448189_CDS_0004 4 AcrVA2 0.38 View Alignment uvig_448189_CDS_0004 M K Q E ---F -C K ---F -------T -V E S L --------------------------------(60)
M+
AcrVA2 M H H T I A R -M N A F N K A F A N A K D C -Y K K M -Q A W H L L N K P K H A F F P M Q N T P A L D N G L A A L Y E L
uvig_448189_CDS_0004 ------------------------------------------------------------ (120)
AcrVA2 R G G K E D A H I L S I L S R L Y L Y G A W R N T L G I Y Q L D E E I I K D C K E L P D D T P T S I F L N L P D W C V Y
uvig_448189_CDS_0004 ----------------------------------------------S A S Y I P F P R F L M E D (180)
+ + P
AcrVA2 V D I S S A Q I A T F D D G V A K H I K G F W A I Y D I V E M N G I N H D V L D F V V D T D T D D N V Y V P Q P F I L S
uvig_448189_CDS_0004 C ---F A G ----L -----T -N D A K V L ----Y A L M L D -R A S I S K V N G -Y I D S D G -------T (240)
A + L L + I G
AcrVA2 S G Q S V A E V L D Y G A S L F D D D T -S N T L I K G L L P Y L L W L C -V A E --P -D -I T Y K G L P V S R E E -
uvig_448189_CDS_0004 -I R L ------------Y F T V E Q A Q K K L H -R -S R -Q -S V T -R I F -Q Q L E C ----S -G L -I - (300)
R E + V R +
AcrVA2 L T R -P K H S I N K K T G A F V T P S E P F I Y Q I G E -R L -G -S E V -R R Y -Q S I -I D G E Q K R N R -P H T
uvig_448189_CDS_0004 C R ----R K ----Q ---G -L -G K P A M I T L N Y P S D A K L I Q P K E D S A K P -S G (349)
R R G P + +
AcrVA2 K R P H I R R G H W H G -Y W Q G T -G Q A K E F R V R W Q P A V --F V -N S --G -R V S -S
uvig_448189_CDS_0004 5 AcrVA3 0.38 View Alignment uvig_448189_CDS_0004 M K Q -E -F -C -K F T V E S L -----------S A S ------------Y ---------I ------(60)
M
AcrVA3 M V G K S K I D W Q S I D W T K T N A Q I A Q E C G R A Y N -T V C K M R G K L G K S H Q G A K S P R K D K G I S R P Q
uvig_448189_CDS_0004 P -F ---------P -R -F -L M -E D ---C -F -A G L T N D A K V L Y A L M L -D R A S I S K V N G Y I D S (120)
P + T L
AcrVA3 P H -L N R L E Y Q A L A T -A -K A -K A S P K A -G R F E T N T K A K T W --T L K -S ----P ---------
uvig_448189_CDS_0004 D G T I R L Y F T V E Q A Q K K L H R S R Q S V -T -R I F -Q -Q L E C -S G L I -C R R K Q G L G K P A M I T L N Y (180)
D + R K
AcrVA3 D N K T Y T F T ----------N L M H -F V -R T N -P -H L F -D P D D -V V W R T K -S -N G V E -W -C R A
uvig_448189_CDS_0004 P S D A K L -I Q ---P ------K E -D S --A -K -P S G (213)
S + L + +
AcrVA3 S S G L A L L A K R K K A P L S W K G -W R L I S L -T -K D N K
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;