3D Structure for uvig_439233_CDS_0026 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 88.53 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_439233_CDS_0026 1 AcrIE2 0.71 View Alignment uvig_439233_CDS_0026 M E K Y R V E F T E A E N S A C -Y T G E W Y L E I T E -A D -S Y V D A F D N I K Q L M I E D ----D V ------(60)
M Y + N+ +GE + + + + A + Q+ E+
AcrIE2 M N T Y L I -D P R K -N N D -N -S G E R F -T V -D A V -D I T A A A K S A A Q Q I L G E E F E G L V -Y R E T G E
uvig_439233_CDS_0026 E P E E --F I F R A -K T -D --E -D -----T E -W -V Y D (94)
F
AcrIE2 S N G S G M F Q A Y H H L H G T N R T E T T V G Y P -F H -V M E L
uvig_439233_CDS_0026 2 AcrIIA27 0.70 View Alignment uvig_439233_CDS_0026 M E K Y R V E F T E -A E N ---S A C Y T G E W Y L E I T E A D S Y V D A F D N I K Q L M I E D D V ---E P E E -F (60)
M + +E A S + + EA + +AF ++
AcrIIA27 M K T F N I I V S E S A N L K E H S S E L V -D N I I Y K V E A K N R R E A F K K A R E E Y S F S S K W K F N ---M R
uvig_439233_CDS_0026 I F R A K T D E ----D ----T E W -V Y D (84)
A
AcrIIA27 D L T A I D N T H R R A -W G R R Y L R V E E A
uvig_439233_CDS_0026 3 AcrIC9 0.67 View Alignment uvig_439233_CDS_0026 M -E ---K Y -R V E F T E A E N S A C Y T G E W Y L E I T E -A D S Y V D A F D N I K Q L M I E D D V E P E E F I F (60)
M + + L + +D+ D +
AcrIC9 M E T K M T S F Y K -I T A -Y ------N -S Q A L Y F --W -G T D A D V D R Y -V D W L N R D R E I N -V Y A A
uvig_439233_CDS_0026 R A K T D E ----D --------T ------E -W --V -Y D (95)
A +
AcrIC9 E A I P E A E W A Q Y E G R D D V L S G E E C G W D -D -F M S A E A
uvig_439233_CDS_0026 4 AcrIIA20 0.65 View Alignment uvig_439233_CDS_0026 M E K Y R V E F T E A E N S A C Y T G E -W Y L E I T E A D S Y V D A F D N I K Q L M I -E D D V E P E E F I F R A K T (60)
M Y V +E T +++ A D I
AcrIIA20 M K N Y E V T -N E -----V --K -N L -N --T Q V E T I G Q A V D L Y ----K E -Y ---G S N T I V W S I D
uvig_439233_CDS_0026 D ---------E -----D --T E W V Y D (85)
E
AcrIIA20 K N E D L I D E V T E L V A E Y A E K G T V -I K
uvig_439233_CDS_0026 5 AcrIF9 0.63 View Alignment uvig_439233_CDS_0026 M E -K Y R V E F T E A E N S A C Y T G E W Y L E I T E A D S Y V D A F D N I K Q L M -I -E D D V E P E E F I F R A K (60)
M Y + N EA S A + + R+
AcrIF9 M K A A Y I I K E -V -Q N I -N S -E R -E G T Q I E A T S L S Q A K R I A ----S -K -E Q C F H G T V -M R I E
uvig_439233_CDS_0026 T D E ---------D -T E W V Y -D (81)
T WV
AcrIF9 T V N G L W L A Y K E D -G K R W V D C Q
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;