3D Structure for uvig_439131_CDS_0053 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 86.93 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_439131_CDS_0053 1 AcrIE6 0.73 View Alignment uvig_439131_CDS_0053 M T R E Q A E R K I E A K K Q F I S I L S E E M Q E A I E K Y K F D -E -E Y W -Q H Q K S R A R L K A T M K M I R R E (60)
M+ +E +L +E + + + + + K +
AcrIE6 M N -N D -T E V L E Q Q I K A F E L L A D E L K D R L P T L ---E -I L S -P M Y T A V M V T Y D L I G K Q L A S R
uvig_439131_CDS_0053 T I A L E K L ----M -Y N W -Y E -M ----E -V (88)
+ L +
AcrIE6 R A E L I E I L E E Q -Y P G -H A A D L S I K N L C P
uvig_439131_CDS_0053 2 AcrIF23 0.61 View Alignment uvig_439131_CDS_0053 M -T R E Q A E ----R K -------I E ---------A ---K K ----------------------(60)
M + + I
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I -D L E T G I A Y D P S Y N Y -A A N T R R A S L S P R G I D A R A V A K T
uvig_439131_CDS_0053 -----------------Q -F I S I L -S E E M --------Q E A I E K Y K F D E E Y W --Q ---H Q - (120)
W +
AcrIF23 F G G R A L T G T A R Q K E W A E -K I R A E -K V Q Q -M N Q D Q A E M A C D P S G L L T A A K F W I E N R N D S A Q
uvig_439131_CDS_0053 ---K S R A R L K A T M K M I R R E T ----I -A L -E K L M Y N W Y E M ---E -V (165)
KA R + K+
AcrIF23 E I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K -V A K I A A E Y N A L T A R W G F
uvig_439131_CDS_0053 3 AcrIE1 0.60 View Alignment uvig_439131_CDS_0053 M --T ----R E -Q -A E -----------R K ----I -E -A -K K Q -F -I S I L S E E M Q E A I E K Y K (60)
M + + E ++ +
AcrIE1 M E K K L S D A Q -V -A L -V A A W R K Y P D L R E S L E E A -A -S -I -L S L -I -V F Q A E T L S D Q A N E L A
uvig_439131_CDS_0053 F D E E Y W Q H Q K S R A -R L -K A T -M K M I R R E -T -I A L E K ---L M Y N W Y E -M ----E V (114)
+ + + M + + Y
AcrIE1 N Y I R R Q -G L E E A E G -A C R -N I D I M R A K -W -V E V C G E V N Q H G I R V Y G D A I D R D V D
uvig_439131_CDS_0053 4 AcrIIC4 0.60 View Alignment uvig_439131_CDS_0053 M -T -R E Q A E R K ----------------I -E -A -K K -Q F I S I L S E E M Q E A I E K Y K F D E E Y W (60)
M + + E + A + K E
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H -R -E -P I -K G L F K S A V E Q F S S A R D F F K N -E N -Y
uvig_439131_CDS_0053 Q H Q K S R A R L K -A T M -K -M I R -R E T I A L E K L M Y N W Y E M -E V (100)
++ K + + L
AcrIIC4 S K E L A E K F N K E -A V N -E -A V E -K L Q K A I D L A E K Q G I -Q -F
uvig_439131_CDS_0053 5 AcrIF3 0.52 View Alignment uvig_439131_CDS_0053 M T ---R E Q A E R K ----I E A -K K -----------------------Q -F -I -S I L S E E M Q E (60)
M+ + + + + L+
AcrIF3 M S S T I S D R I I S R S V I E A A R F -I Q S W E D A D P D N L T E S Q V L A A S S F A A R -L -H E G L Q A T V L Q
uvig_439131_CDS_0053 A I E K Y K F ------D E E Y W ----------------Q ----H Q K S R A -R -L -K A T -------(120)
+ +
AcrIF3 R L V D E S N R D E Y R E F Q A W -E E A L L N A D G R V T S N P F A D W G W W Y R I A N V -M -L A T -A S Q N V G V
uvig_439131_CDS_0053 --M K M -I R R E T I A L E K -L M Y N W Y E M E -V (148)
R ++ + YE E
AcrIF3 A W G S H V H G R L M A I F Q -D R F Q Q H Y E D E E C
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;