3D Structure for uvig_439131_CDS_0043 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.30 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_439131_CDS_0043 1 AcrIE6 0.73 View Alignment uvig_439131_CDS_0043 M N -I -V E V K K K Y N Y W L G R Y L K A E E F I N S S E -----P -E -E V D K Y L G -L -F -H Q -I -V R E -(60)
MN + + + + + + E Y + +
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T -A V M V T Y D -L -I -G K -Q -L A S -R
uvig_439131_CDS_0043 L S L L -I Q E F R K A T -G -K E M T K K E -M Y -E G F N E V K N D S C N L (100)
I
AcrIE6 R A E -L I E I L E E Q -Y -P G H A ----A -D L ----S -I K N -L C P
uvig_439131_CDS_0043 2 AcrIIC4 0.60 View Alignment uvig_439131_CDS_0043 M -N -I V E V K K K Y N Y W L G R Y L K A E E F I N S S E P E E V D K Y L G L F H Q I V R E L S L L I Q E F R K A T -(60)
M + ++ + GLF+++V S + F+
AcrIIC4 M K I T S S N ----F A T I A -T S E N F A K -L S V L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E -N
uvig_439131_CDS_0043 G ------K E -M -------T K -K E M Y E G F -N -E -V K N D S C N L (101)
+ +
AcrIIC4 -Y S K E L A E -K F N K E A V N E A -V E K L Q K A -I -D -L A E K Q G I Q F
uvig_439131_CDS_0043 3 AcrIE1 0.60 View Alignment uvig_439131_CDS_0043 M --N ----I V -E V K ---K ----K --------Y ----N Y ----W L G R Y L -K A E E -F I N -S S (60)
M + + + +
AcrIE1 M E K K L S D A Q -V A L V A A W R K Y P D -L R E S L E E A -A S I L S -L I V F Q A E T L S D -Q A N E L -A N Y I
uvig_439131_CDS_0043 E P E E V D K Y L G L F H Q I V R E L S L L I Q E F R K A T G K E -M T K K E M Y E G F N -E V K N D S C N L (115)
L + R + + + + G E + + +
AcrIE1 R R Q ----G L E E A E G A C R N I D I M R A K W V E V C G -E V N Q -H -G I R V Y G D -A I D R D V -D
uvig_439131_CDS_0043 4 AcrIIA28 0.58 View Alignment uvig_439131_CDS_0043 M -N ------I V E V K -K K ----Y N Y W L G R Y L K A E E -F I N S -S E P E E V D K Y L G L F H Q I V R E L (60)
M + E+ + + + +
AcrIIA28 M K T I F T K K Q T E E L L N D I S I E K Q K E L F N S M H D F R S Q H A K -E A ---R I P G W S D K Y N K L E K K M
uvig_439131_CDS_0043 S L L I Q -E F R K A T G K E M T -K K E M Y E G F N E V K N D S C -N L (97)
+ + N N
AcrIIA28 L S D F E E V T G I K -Y D T L E S -E L I W D N ---L S N K F L Y N S
uvig_439131_CDS_0043 5 AcrIF23 0.53 View Alignment uvig_439131_CDS_0043 M -N I V E -V K K ---K -------Y --------N -----------------------------(60)
M N +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
uvig_439131_CDS_0043 ----Y -W L -G ----R Y L K A E E F I N ----S S ----E P E E V D K Y L G L F H Q I V R E L S L L I Q E F (120)
K+ + + L + + + + +QE
AcrIF23 G R A L T G T -A -R Q K E W A E K I R A E K V Q Q M N Q -D Q A E M A C D P S G L L T A A K F W I E N R N D S A Q E I
uvig_439131_CDS_0043 R K A T -G -K E ------------M ----T K K E M Y E G F N E V K N D S C N L (165)
N +
AcrIF23 A G F -V -M Q Q K A L L A Q H R S A K A A G Q A D K V A K I A A E Y N A L T A R -W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;