3D Structure for uvig_436209_CDS_0028 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 95.47 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_436209_CDS_0028 1 AcrIB1 0.71 View Alignment uvig_436209_CDS_0028 M I Q K Q -T W -----------------------------------------K -D E -I -R I L I (60)
M +K+ K ++
AcrIB1 M E S K N L R K L L N E Y E E I D I N E M L K N F R S I K N S G T K N D I E I F L H E K A I K F E K S S I S S T Y V V F
uvig_436209_CDS_0028 T -D E E N L G S V Q I G I P F -Y ----V S N -I F ------------------G -K A D A L I Y A L F V D (120)
+ D E LG +I + L+ L
AcrIB1 S E D N E I L G Y F T I A N R S L V I P K E N F G I L S K T Q Q K K L G N S A A I L K N G D L M T S S F L L G Q L G K N
uvig_436209_CDS_0028 N -N H -R -R N G V A Q ----R L L -Q -L A E Q -Q -A K L N G V K T I G L E F N K D E S D R F V L D W Y L R S G (180)
+ L L VK I LE + + ++ +Y G
AcrIB1 Y S D D I -E N L I T G R E L L T F A -Y -D L F L -K -I K E L I N V K Y I W L E C Q N ---E P K L I S F Y Q N F G
uvig_436209_CDS_0028 Y K P F N K ---K --S N L L I K K L E D (202)
K + I L
AcrIB1 F K M L E S L T S E E G L K V M I M E L -K
uvig_436209_CDS_0028 2 AcrVA5 0.71 View Alignment uvig_436209_CDS_0028 M I Q K Q T W K D E I R I L I T D E E N L G S V Q I G I P F Y V S N I F G K A D A L I Y A L F V D N N H R R N G V A Q R (60)
M G + I ++ I + V + +R+G+ +
AcrVA5 M -K -I E L ---------S G ---G Y I C Y S I ---E -----E D E V T I D M V E V T -T -K R Q G I G S Q
uvig_436209_CDS_0028 L L Q L A E Q Q A K L N G V K T I G L E F N --K -D E S D R F V L D W Y L R S G Y K P F N K -K -S N L L I K K L E D (120)
L+ + A+ IGL S ++++Y + L +
AcrVA5 L I D M V K D V A R E V -G L P I G L Y A Y P Q D D S I S Q E D L I E F Y F S N D F E Y D P D D V D G R L -M R -W -S
uvig_436209_CDS_0028 3 AcrIF5 0.42 View Alignment uvig_436209_CDS_0028 M I Q K Q T W K D E -I R I L I T D E E N L G S V Q I G I P F -Y V S N I F G K A D A L I Y A L F V D N N H R R N G V A (60)
M + + + + + + +
AcrIF5 M -S ----R -P T V V T V T E ---T P R -N ---P G -S -Y E V N V E R D G K M V V G R A R A -G ----S D P
uvig_436209_CDS_0028 Q R L L Q L A E Q Q A K L N G V K T I G L E F N K D E S D R F V L D W Y L R S G Y K -P F N K K -S N L L I K K L E D (119)
++ A Q A G + + + L
AcrIF5 G A A A A K A M Q M A M E W G S P N Y V I L G --S ---N ---K V L A F ----I -----P -E Q L R V -K -M
uvig_436209_CDS_0028 4 AcrIIA28 0.40 View Alignment uvig_436209_CDS_0028 M I Q K Q T W K D E I R I L I T D E E N L G S V Q I G I P F Y V S N I F G K A D A L I Y A L F V D N N H R R N G V A Q R (60)
M K + + +
AcrIIA28 M -K T I F T K K Q T E E -L -L N D --------------------------I -------S I E K Q K E
uvig_436209_CDS_0028 L L Q L A E Q Q A K L N G V K T I G L E F -N -K D ---E S D R F V L D W Y L R S G Y K P F N K -K ----S N L L -(120)
L + +K + + D ++ L L
AcrIIA28 L F N S M H D F R S Q -H A K E A R I P -G -W S D K Y N K L E K K M L S D F E E V T G I K Y D T L E S E L I W D N L S
uvig_436209_CDS_0028 I -K K L E -D (128)
K L
AcrIIA28 -N K F L Y N S
uvig_436209_CDS_0028 5 AcrVIA1_Lse 0.40 View Alignment uvig_436209_CDS_0028 M I Q K ---Q T W -------------K -------D -E -I R I L I T --D -E E -N -L G S V Q I G I P F (60)
MI + +
AcrVIA1_Lse M I Y Y I K D L K V K G K I F E N L M N K E A V E G L I T F L K K -A E F E I Y S R E N Y S -K -Y N K W F E M W K S P
uvig_436209_CDS_0028 Y -V S N I F G K A D A L I Y -A L -F V D N N H R R N G V A Q ----R L L -----Q ------------L A E (120)
+F K +L ++ G+ + +
AcrVIA1_Lse T S S -L V F W K N Y S F R C H L L F V I E K D G E C L G I P A S V F E S V -L Q I Y L A D P F A P D T K E L F V E V C
uvig_436209_CDS_0028 Q Q A K L N -G V K T I G L -E F -N ----K ----D E S D R ----------------F V L D W Y L R ---(180)
+ T + F ++ + ++
AcrVIA1_Lse N L Y E C -L A D V T -V V E H F E -A E E S A W H K L T H N E T E V S K R V Y S K D D D E L L K Y I P E F L D T I A T
uvig_436209_CDS_0028 ---------S G Y K P F -------N K ----K ------------S N -------L L ----I -K - (240)
AcrVIA1_Lse N K K S Q K Y N Q I Q -G K I Q E I N K E I A T L Y E S S E D Y I F T E Y V S N L Y R E S A K L E Q H S K Q I L -K -E
uvig_436209_CDS_0028 K -L E D (245)
AcrVIA1_Lse -E -L N
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;