3D Structure for uvig_435626_CDS_0014 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 80.59 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_435626_CDS_0014 1 AcrIE1 0.71 View Alignment uvig_435626_CDS_0014 M A E G ----N K Q M T -C V -------P -N -Y -K -A -Y -Y E E -Y -K D -------K Y N -C M C E -K (60)
M + +
AcrIE1 M E K K L S D A Q V A L V A A -W R K Y P D L R E -S -L -E -E -A -A S I -L -S L I V F Q A E T L S D -Q A N E L
uvig_435626_CDS_0014 V -H -N I E E K L ----K -K E H D -R N M I L E G ----Q M -E ---V V -R L I F G G N G -N --G (115)
I I + G
AcrIE1 -A -N Y I R R Q G L E E A -E G A C -R N I D I M R A K W V E V -C G E V N Q H G I R V Y G D A I D R D V D
uvig_435626_CDS_0014 2 AcrIC3 0.61 View Alignment uvig_435626_CDS_0014 M A -E G N K -Q --M -T -C V ------P N Y -K -A -------Y Y -E -E Y K D --------------(60)
M + +
AcrIC3 M S I Q V T S T N G R T V -N L E I E L G S V V A S S -G Q V K F M A D K T -D -R G L E -S R F L V P E A G N R R I E
uvig_435626_CDS_0014 --K Y N C M C E K V H N I E E K L K -K E H -D -R N M I L E G Q M E V V R L I F G G N G N G (108)
E + + L N I G
AcrIC3 V A L T G R D L E A A N A L F S E L A A -S V E -A T N E M Y R E L D A E R A Q I N -K A L E G
uvig_435626_CDS_0014 3 AcrIE6 0.60 View Alignment uvig_435626_CDS_0014 M A E G N K Q M -T C V P N Y K A Y Y E ---E Y K D -------K Y N C M C E K V H N I E E K L K K E H D R N M I -(60)
M + + + + + + Y+ I L +
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I E I
uvig_435626_CDS_0014 L E G Q M E V V R L I F G G N G N -G (79)
LE Q +
AcrIE6 L E E Q Y P G H A A D L S I K N L C P
uvig_435626_CDS_0014 4 AcrIF23 0.54 View Alignment uvig_435626_CDS_0014 M A E G ------N K Q M T C V --------P N Y K -A ------Y Y -E -------------------(60)
M A Y
AcrIF23 M T N F Q T W L D S A D I P V -Q Q N G Q W I D L E -T G I A Y D P S Y N -Y A -A N T R R A S L S P R G I D A R A V A
uvig_435626_CDS_0014 -----------------------E Y -K D ------------K Y N C M C E K V H N I E E ----K L (120)
E + ++ E
AcrIF23 K T F G G R A L T G T A R Q K E W A E K I R A E -K V -Q Q M N Q D Q A E M A C D P S G L L T A A K F W I E N R N D S -
uvig_435626_CDS_0014 -K -K -E -H D ----R N M I L E G --------Q M -----E V V R L I F G G N G --N -G (171)
+ +L + +
AcrIF23 A -Q -E -I -A G F V M Q Q K A L L A Q H R S A K A A G -Q A D K V A K I A A E Y N A L T A R W G F
uvig_435626_CDS_0014 5 AcrIIA11 0.54 View Alignment uvig_435626_CDS_0014 M A -E G N K Q ---M ---T -C V --------------------P N ----Y K -A -Y Y -E ------(60)
MA +Q
AcrIIA11 M A D M T L R Q F C E R Y R K G D F -L A K D R E T Q I E A G W Y D W F C D D K A L A G R L -A -K I -W G I L K G I T
uvig_435626_CDS_0014 ----------E Y K -D --------------------------------------------- (120)
AcrIIA11 S D Y I L D N Y R V -W F K -N N C P M V G P L Y D D V R F E P L D E E Q R D E L Y F G V A I D D K R R E K K Y V I F T
uvig_435626_CDS_0014 -------------------K Y N C M C E K V H -----N I E E K L K K -E H D -R -N M I L E G Q M E V V (180)
N + ++ + EK + + N M +
AcrIIA11 A R N D Y E N E C G F N N V R E V R Q F I N G W E D E L K N E E F Y K A R E K K R Q E -M E E -A N N K F A E I M Q R A
uvig_435626_CDS_0014 R L I F G G N G N G (190)
I
AcrIIA11 D E I L W N L K E D
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;