3D Structure for uvig_434888_CDS_0085 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 97.49 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_434888_CDS_0085 1 AcrIE6 0.71 View Alignment uvig_434888_CDS_0085 M D I K ---K -Y K E M Y ---N H L L Q R Y Q D G I N Y I T D H P E K V D D Y V K D I N E I Q S V A E F F L K E I M (60)
M L+ D + + I + E+
AcrIE6 M -N N D T E -V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I
uvig_434888_CDS_0085 R K Q K V S K D -E I -L -G G F K -I --E Q (84)
+
AcrIE6 E I L E E Q Y P G H -A -A -D L S I K N L C P
uvig_434888_CDS_0085 2 AcrIE1 0.58 View Alignment uvig_434888_CDS_0085 M --D ----I -K -K -Y -K -E -----------M Y -----N -H -------L L Q R Y Q D G I N Y I T (60)
M + +D +N +
AcrIE1 M E K K L S D A -Q -V -A -L -V -A A W R K Y P D L R E S -L E E A A -S -I L S L I V F Q A E T L S D Q A N E L A
uvig_434888_CDS_0085 D -H P E -K V -D D Y V K D I N E -I -Q S V A E F F -L K E I M R K Q K V S K D E I L G G F K I -E -Q (114)
++ E+ + G +
AcrIE1 N Y I R R Q -G L E E A E G A C R -N -I D I M R A -K W -V E V C G E V N Q H G I R V Y G D A I D R D V D
uvig_434888_CDS_0085 3 AcrIF23 0.57 View Alignment uvig_434888_CDS_0085 M -D I K K Y -K E ----------M Y ------------N -------------------------(60)
M
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W -I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
uvig_434888_CDS_0085 ----------------H L ----L Q -R Y Q D G I N Y I T D H P E K -V D D Y V K D I N E I Q S V A E --- (120)
++ + + P + I + A
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E K V -Q Q M N Q D Q A E M A C D P S G L L T A A K F W I E N R N D S A Q E I A
uvig_434888_CDS_0085 F F L K E I M R -K -Q -K ----V ---------S K D E I L G G -F K I ---E -Q (166)
F+ I+ +
AcrIF23 G F V M Q Q K -A -L -L -A Q H R -S A K A A G Q A D K V A K I A A E Y N A L T A R W G F
uvig_434888_CDS_0085 4 AcrIIC4 0.56 View Alignment uvig_434888_CDS_0085 M D -I -K K Y K E ----------------M ---Y N ----H -L L Q R Y Q D G I N Y I T D H P E K V D D Y (60)
M ++ + +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L F K -S A V E Q F S S A R D F F K N E N Y S K E L A
uvig_434888_CDS_0085 V K D I N E I -Q S V A E F F L K E I M R K Q K V S K D E I L G G F K -I E Q (99)
K ++ + + + + +
AcrIIC4 E K ---F -N K E A V N E A V E K L Q K A I D L -A E K ---Q G -I Q -F
uvig_434888_CDS_0085 5 AcrIIA28 0.55 View Alignment uvig_434888_CDS_0085 M D ---I -K -K Y K E M Y N H ----L L Q -R Y Q D G I N Y I T D H P E K V --D D Y V K D I N E I Q S V A E F F (60)
M E N + + H + N +
AcrIIA28 M K T I F T K -K Q T E E L L N D I S I E K Q K E L F N S M H D F R S Q H A K E A R I P G W S D K Y N K L E K K M L S D
uvig_434888_CDS_0085 L -K E I M R K Q K V ------S K D E I -L G G F K I -E Q (92)
K D + +
AcrIIA28 F E E V T G I K Y D -T L E S E L I W D N -L S -N K F L Y N S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;