3D Structure for uvig_418662_CDS_0028 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 85.89 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_418662_CDS_0028 1 AcrIE1 0.71 View Alignment uvig_418662_CDS_0028 M E -N ---V N G -L M ---L ----------D --------M -V -------A D L Y K R A ----Q E -(60)
ME ++ + + D +
AcrIE1 M E K K L S D A Q -V A L V A A W R K Y P D L R E S L E E A A S I L S L -I -V F Q A E T L S D Q A N E L A N Y I R R Q
uvig_418662_CDS_0028 G -E Q ----Y Y G E T L D L K Y E I Q A L K A R I ----Q E L -E -A R L ---N -D (106)
+ + + + + D
AcrIE1 -G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y -G D A I D R D -V D
uvig_418662_CDS_0028 2 AcrIC3 0.59 View Alignment uvig_418662_CDS_0028 M -E N V N G ---L -M ------L ---D ----------M V ----A -------------------(60)
M +V+
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S S G Q V K F M A D K T D R G L E S R F L V P E A G N R R I E V A L T G
uvig_418662_CDS_0028 D L Y K R A Q E G -E -Q Y Y G E T L D L K Y E I Q A L K A R I Q E L E A R L N D (101)
A+ L A + L
AcrIC3 R D L E A A N A L F -S E L A A S V E A T N E M Y R E L D A E R A Q I N K A L E G
uvig_418662_CDS_0028 3 AcrIF23 0.57 View Alignment uvig_418662_CDS_0028 M E N ---V N G ---L M ---L ------------------------------D -----------(60)
M N +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
uvig_418662_CDS_0028 -------------------M V --------A ----------D L Y K -R A -Q E G ---E Q Y Y G - (120)
A + K Q
AcrIF23 G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P S G L L T A A K F W -I E N R N D S A Q E I A G
uvig_418662_CDS_0028 ---E T L D L K Y E I Q A L K -A --------R -I -Q -E -L E A R L N ---D (164)
+ L +K + A
AcrIF23 F V M Q Q K A L L A Q H R S A K A -A G Q A D K V A K I -A -A -E Y N A L T A R W G F
uvig_418662_CDS_0028 4 AcrIE6 0.57 View Alignment uvig_418662_CDS_0028 M E N V N ---G L M L D ----M V A D L Y K R A Q E G ---E ----Q -------Y Y G E T L D L K Y E I Q -A (60)
M N + + + +L R+ + + E+
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I E -
uvig_418662_CDS_0028 -L -K -A -R I -Q E L E -A -R L ----N D (85)
A
AcrIE6 I -L -E -E Q -Y P G H -A A D L S I K N L C P
uvig_418662_CDS_0028 5 AcrIIA11 0.50 View Alignment uvig_418662_CDS_0028 M E -N V N -G ---L -M ------------L ------------------------------D --(60)
M +
AcrIIA11 M A D M T L R Q F C E R Y R K G D F L A K D R E T Q I E A G W Y D W F C D D K A L A G R L A K I W G I L K G I T S -D Y
uvig_418662_CDS_0028 ------------------------------------------------------------ (120)
AcrIIA11 I L D N Y R V W F K N N C P M V G P L Y D D V R F E P L D E E Q R D E L Y F G V A I D D K R R E K K Y V I F T A R N D Y
uvig_418662_CDS_0028 --------------M V -A -D L Y K -R A Q E -G E Q ---Y ----Y G E T L D L K Y E I Q A L K A R I Q E (180)
+ E E ++ + R+ E
AcrIIA11 E N E C G F N N V R E V R Q F -I -N G W E -D E L K -N -E E F Y K A R E K K R Q E M E E A N N K F A E I M Q R A D E
uvig_418662_CDS_0028 L E A R L N -D (188)
+ L D
AcrIIA11 I L W N L K E D
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;