3D Structure for uvig_418193_CDS_0002 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.53 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_418193_CDS_0002 1 AcrIIA7 0.78 View Alignment uvig_418193_CDS_0002 M N F G K A L E E L K N G N K I A R E G W N G K G M Y I F -K H E G -F ----D T --------N E V ----S N I (60)
M+FG ALE LK G +AR GWNGKGM IF + E N
AcrIIA7 M T F G Q A L E S L K R G H L V A R K G W N G K G M F I F M R P E D S L P T N M I -V N Q V K S L P E S F K R W V A N N
uvig_418193_CDS_0002 T G N K H D ---N -V P P F I C M K T A D K N V V F G W L A S Q T D M F A E D W K I I R (105)
G +CMK AD ++V GWLASQTDM A DW I+
AcrIIA7 H G D S E T D R I -K F T A Y L C M K A A D G T I V N G W L A S Q T D M L A N D W V I V E
uvig_418193_CDS_0002 2 AcrIIA4 0.55 View Alignment uvig_418193_CDS_0002 M N F G K A L E E L K N -G N K I A R E G W N --G -K G M Y I -F K H -E G F D T N E V S N I T -G N K H -D N V -P (60)
MN ++ E+KN + G I +G I+ + ++
AcrIIA4 M N I N D L I R E I K N K D Y T V K L S G T D S N S I T Q L I I R V N -N D G N -E Y V ---I S E -S E N E -S I V E
uvig_418193_CDS_0002 P F I C M K -T A -D -K N V V F G W L -A S Q T D M F A E D --W K --I --I R (102)
FI A N + + +
AcrIIA4 K F I ---S -A F -K -N G W N Q E -Y E D E E E F Y N D M Q T I T L K -S E L N
uvig_418193_CDS_0002 3 AcrIIA12 0.55 View Alignment uvig_418193_CDS_0002 M N ---F -G K A L ---E E L K -N -G N K I A R E G --W -N -G K G M -Y I F K H -E G F D T N E V S N I T G N (60)
M+ ++ +K ++ + Y F+ E +++ G
AcrIIA12 M S K T M Y K N D V I E L I K N A K T -N N E E L L F T S V E R N T R E A A T Q Y -F R C P E K H V -S D A G V Y Y G -
uvig_418193_CDS_0002 K H D N V -P -P -F I C M K T A D K N V V F G W L A S Q T D M F A E D W K I I R (101)
+ ++ + +
AcrIIA12 E D F E -F -D -G -F E I F --E D D L I Y T R S -----Y --D -K E E L N
uvig_418193_CDS_0002 4 AcrIF18 0.54 View Alignment uvig_418193_CDS_0002 M N F G K A L E E L K N G N K -I -A R E G -W N -G K G M Y I F K H E G F D T N E V S N I T G N K H D N V P P F I C M (60)
M+ + ++ WN G Y F
AcrIF18 M T T --I -K ---A A Y -I -S -K D Q N W N D G T T T Y W F D V ----------------N --G E T F G V
uvig_418193_CDS_0002 K T A D K N V V F G -W -L -A S ----Q -T -D M -F A E D ----W K I I -R (102)
+ ++ I
AcrIF18 V H G G E S W N -A K -V -V D C D G A P -S -D Q -Y T V D Q F N I T E D M I A E
uvig_418193_CDS_0002 5 AcrVIA3 0.54 View Alignment uvig_418193_CDS_0002 M N F G K A L E E L K N -G N K -I A R E G W N -G K G M Y I F K -H E G F D T N E V S N I T G N K H --D -N -V P P (60)
M LE GN + E K + G T E+S + +
AcrVIA3 M F K -E F L E K C L R Y G N -L Y I L E E T G D R K K V K R I S K R H G K V T -E A S V L L F D S G T K R T -T I N E
uvig_418193_CDS_0002 F I C M K T A D K N V V F -G W L A S Q T D M F A E -D -W K I I R (94)
I + + + +
AcrVIA3 -I Y L -N S Q G Y F I I R -D -Q -K --R -L -K -L E -K F K
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;