3D Structure for uvig_415229_CDS_0028 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.48 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_415229_CDS_0028 1 AcrIE1 0.70 View Alignment uvig_415229_CDS_0028 M N N T ---R R R R I R -----------A L I A ----A C E S -L R D Q L A D L S A E E D R A Q A S M P E N L (60)
M + + + + Q+ LS +
AcrIE1 M E K K L S D A Q V A L -V A A W R K Y P D L R E S L E E A A S I L S -L I V F Q A E T L S D Q A N E L A N Y I -R R Q
uvig_415229_CDS_0028 I E ----S P Q Y I R M D W A C I H M D R A R A A A E T A I A -E -M -T E A ----M -Q (107)
D ++ + + + + +A
AcrIE1 -G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R -V -Y G D A I D R D -V D
uvig_415229_CDS_0028 2 AcrIIC4 0.62 View Alignment uvig_415229_CDS_0028 M N N --T R R R R I ------R ----A L I A -A C E S L R D Q L A D L S A E E D R A Q A S M P E N L -I E S P Q (60)
M + I +L E ++ + A
AcrIIC4 M K I T S S N F A T I A T S E N F -A K L S V L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N Y S K E L A
uvig_415229_CDS_0028 -Y I R M D W A C I H M D R A R A A A E T A I A E M T E A M --Q (93)
+ A + AI
AcrIIC4 E ----K F N K E A V N E A V E K L Q K A I D L A E K Q G I Q F
uvig_415229_CDS_0028 3 AcrIE6 0.61 View Alignment uvig_415229_CDS_0028 M N N T R R R R I R A L I A A C E S -L R D Q L -A D L S -A E E -D -R A -Q -A S M P E N L I E S P Q Y I R M D --(60)
MN + +L L E + I SP Y
AcrIE6 M N -N D ---T E V L E Q ----Q -I K A F E -L L A D -E L K -D -R L -P -T L ---E I L S P M Y T A V M V T
uvig_415229_CDS_0028 --W A C I H M D R A R A A A E T A I -A E M ---T -----E A -M Q (97)
+ RA + ++
AcrIE6 Y D L I G K Q L A S R R A E L I E I L E E Q Y P G H A A D L S I K N L C P
uvig_415229_CDS_0028 4 AcrIC3 0.56 View Alignment uvig_415229_CDS_0028 M N N T R R R ----R I ---R ----A L I ---A -------A C E S -L R D -Q L A D L S A E E D R A Q A S M (60)
M+ + + ++ + + + +
AcrIC3 M S I Q V T S T N G R T V N L E -I E L G S V V A S S G Q V K F M A D K T D R G -L E S -R F L V P E A ---G N R R I
uvig_415229_CDS_0028 P E N L -I E --------S -P Q -Y -I -R M -D -W -A C -I H M D R A R A A A E T A I A E M T E A M -Q (117)
++ A + A
AcrIC3 E V A -L T -G R D L E A A N -A -L F -S -E -L A -A -S -V E -A T N E M Y R E L D A E R A Q I N K A L E G
uvig_415229_CDS_0028 5 AcrIF23 0.56 View Alignment uvig_415229_CDS_0028 M N N T R ---R R R ---I ----R -A L --------I -------------------A --------(60)
M+ + +
AcrIF23 M T -N F Q T W L D S A D I P V Q Q N -G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T
uvig_415229_CDS_0028 --------------A C E S L R D Q L --------A D -L -S -A E E D R -A Q A S M -P E N L I E S P Q Y (120)
E +R A + + ++ IE
AcrIF23 F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A -E -M -A C D -P S G L -L T A A -K F W I E -N R N
uvig_415229_CDS_0028 I R M D W A -C I -H M D R A R A A A E T --------A I ---------A E M T E A M ----Q (172)
+ A+ AE + +
AcrIF23 D S A Q E -I -A G F -V M Q Q K A L L A Q H R S A K A A G -Q A D K V A K I A A E Y N A L T A R W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;