3D Structure for uvig_41467_CDS_0033 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 86.03 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_41467_CDS_0033 1 AcrIE6 0.71 View Alignment uvig_41467_CDS_0033 M V V T D N T I I E S A T P K Y P E L M S S D A E D K L K K A F Y N L R E S K S K L ---S K L R M E V I E L E -T -K (60)
M + E+ + + L++ L S V
AcrIE6 M --N ---------N -D T E V L E Q -Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D -L I
uvig_41467_CDS_0033 V K K E E E S Y R N I S D L F E I T F A K -K E I Q E I K N T V N M -G I I N P S D -Y -R N T N I (110)
K + ++ E + + S N
AcrIE6 G K Q L A S R R A E L I E I L E E Q Y P G H -A -------A D -L -----S -I -K -N L C P
uvig_41467_CDS_0033 2 AcrIE1 0.70 View Alignment uvig_41467_CDS_0033 M V V T D N T I ---I E S -A T P K Y P E L M ---S ----S -D -A -E -D -K -L -K -K A F Y -N L R -E --(60)
M + + + A KYP L
AcrIE1 M E K K L S D A Q V A L -V A A W R K Y P -D L R E S L E E A A -S -I -L -S -L -I -V -F -Q A E T -L S D -Q A
uvig_41467_CDS_0033 --S K S K L S K L -R M -E V -I E L E T K V K K E E E S Y R N I S D L F E I T F A K K E I Q E I K N T V N M G I I N (120)
+ + + E + + + I
AcrIE1 N E L A N Y I R R Q G -L E E -A E G A C R N I D I M R A K W V E V C G E V N Q H ----G I R V Y G -D -------
uvig_41467_CDS_0033 P S D -Y R N T N I (130)
R
AcrIE1 -A -I D R -D V D
uvig_41467_CDS_0033 3 AcrIC3 0.60 View Alignment uvig_41467_CDS_0033 M V V T D N T -I I E -S ---A --T ---P -K Y P E L M S -S D A E D -K L K K -A F Y N L R E S K S K L S K --(60)
M ++ + + A+ + + +
AcrIC3 M S I Q V T -S T N G R T V N L E I E L G S V V A S S -G Q V -K F M A D -K T -D R G -L E S R F L V P E -A --G N
uvig_41467_CDS_0033 ------L -R -M -E V I E L E T K V K K E E E S Y R N I S D L F E I T F A K K E I Q E I K N T V -N M G I I N P S (120)
L ++ + S ++
AcrIC3 R R I E V A L T -G -R D L E A A N A L F S E L A A S V E A T N E M Y R E -----L D A ----E R A ----Q I N -
uvig_41467_CDS_0033 D Y R N T N I (127)
+
AcrIC3 --K A L E G
uvig_41467_CDS_0033 4 AcrIF23 0.56 View Alignment uvig_41467_CDS_0033 M V V ---T ---D N T -I -I E --------S A --------------T ---P K Y P E L --------(60)
M
AcrIF23 M T N F Q T W L D S A D -I P V Q -Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G -I D A R A V A K
uvig_41467_CDS_0033 ------------M S S D A E D K L K K A F Y N L R E S K S -K -L -S K -L R M E -V -I E L E T K V K K E E E (120)
AE + + +
AcrIF23 T F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E -M -A C -D P -S G L -L T A A K F W I E N R --
uvig_41467_CDS_0033 S Y R N -I S D -L F E I T -F A ---K K E I Q -E -I -K -N -T -V N M -G I ----I -N P S D Y R N T ---N (180)
K + + +Y
AcrIF23 --N D S -A Q E -I --A G -F V M Q Q K A L L A -Q -H -R -S -A K A A G Q A D K V A -K I A A E Y N A L T A R W
uvig_41467_CDS_0033 -I (182)
AcrIF23 G F
uvig_41467_CDS_0033 5 AcrIIC4 0.55 View Alignment uvig_41467_CDS_0033 M V V T D N T I I E S A T P K Y P -E L -M S S D A E D K L K K A F Y N L R E -S -K -S K L S K L R M E V I E L E T K (60)
M +T ++ + +S+ KL ++ ++ +
AcrIIC4 M K I T S S N F -A -------T -I A -T S E N F A K L S V -------L -P -K N H R E P I K G L F K S A V E Q
uvig_41467_CDS_0033 V K K E E E S Y R ---N I S -D L -F E I T F A K K E I Q E I K N T V N M G I I N P -S -D -Y R N T N I (114)
+ + S + F K ++E+ ++ I +
AcrIIC4 F S S A R D F F K N E N Y -S K E -L -A E K F N K E A V N E A V E K L Q K A I D L A E -K -Q G I --Q F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;