3D Structure for uvig_414097_CDS_0006 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 89.86 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_414097_CDS_0006 1 AcrIE6 0.71 View Alignment uvig_414097_CDS_0006 M K L E L S Y D D V S T I V A A L L T K V T T A E S N A L K C A K Y G M D K D V E F W Q E R A E T Y K K V Y K V V E A Q (60)
M + + + + A + + + + K A
AcrIE6 M N -N -D T E V L E Q Q I K A F E L L A D E L K D R L P T L -E I -L S P M Y T A V M V T Y D L I G K Q L A S R R A E
uvig_414097_CDS_0006 F G Q A C K -E Y E -Q A D --A ---A L -M -K E (87)
+ Y
AcrIE6 L I E I L E E Q Y -P G H A A D -L S I K N L -C -P
uvig_414097_CDS_0006 2 AcrIE1 0.68 View Alignment uvig_414097_CDS_0006 M -K ----L E L S Y D -----------D ----V S ----T -I -V -A -A -L -L -T -K -V -T -T -A (60)
M K + + +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E -S L E E A A S I L S -L -I -V -F -Q -A -E -T -L -S -D -Q -
uvig_414097_CDS_0006 E S N A L K C A K Y G M D K D V E F W Q E R A E T Y K K V Y K V V E A Q F G Q A C K E Y E Q A D A A L -M K --E (117)
+ ++ ++ + G + + + + +
AcrIE1 A N E L A N Y I R R Q G L E ---E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D V D
uvig_414097_CDS_0006 3 AcrIIC4 0.62 View Alignment uvig_414097_CDS_0006 M K -L -E L -----S Y -D ----------D V S T I V A -A L L T K V -T T A E S N A L -K C A ---K -Y G (60)
MK + + + L + S+A
AcrIIC4 M K I T S S N F A T I A T -S E N F A K L S V L P K N H R E P I K G -L F K S A V E -Q F S S A R D -F F K N E -N --
uvig_414097_CDS_0006 M D K D V E F W Q E R A -E -T Y K K V Y K V V E A Q F G Q A C K E Y E Q A D A A L M -K E (106)
E A K + + A
AcrIIC4 ------Y S K E L A E -K F N K E A V N E A V E K L Q K A I D L ----A E K Q G I Q F
uvig_414097_CDS_0006 4 AcrIC3 0.60 View Alignment uvig_414097_CDS_0006 M K -L E L -S Y D ---D ----V S T I V A A L L ------T ----K V --T ------T A E -S N A L K C A (60)
M + + ++VA + + +
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S S G Q V K F M A D K T D R G -L E S R F L V P E A G -N R R I E V A L
uvig_414097_CDS_0006 -K -Y -G -M D K D V E -F W Q E -R A E T Y K K V Y K V V E A Q F G Q A C K E Y E Q A D A A L M K E (112)
+ ++ A + + + E Q+ +
AcrIC3 T -G -R -D L E A A N -A L F S -E L A A S ----V E A T N E M Y R E L D A E R A Q I N -K A L E G
uvig_414097_CDS_0006 5 AcrIF23 0.58 View Alignment uvig_414097_CDS_0006 M -K L E L ---S Y D ------------D V S ----T I V A -------------------------(60)
M S D +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T -G I A Y D P S -Y N Y A A N T R R A S L S P R G I D A R A V A K T
uvig_414097_CDS_0006 -----------------A L L T K V T -----------T A E S N A L K C A K Y G M D K D V E F W Q E R A (120)
+ S +L AK + +
AcrIF23 F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P S G L L T A A K F W I E N -R N D S A Q E I
uvig_414097_CDS_0006 E T Y K K V Y K V V E A Q F G -Q --------A C K E Y E Q A D A A L M -K --E (163)
K++ AQ + AL +
AcrIF23 A G F V M Q Q K A L L A Q H -R S A K A A G Q A D K V A K I A A E Y N A L T A R W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;