3D Structure for uvig_413097_CDS_0005 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.98 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_413097_CDS_0005 1 AcrIE6 0.71 View Alignment uvig_413097_CDS_0005 M D K M D K K E T M R I K S I E R K A Y E V Y K E V D A L I D H L Q R E N V D -W E I I D E L K S T R D A S C D V V D A (60)
M T + + + + E+ + L + +
AcrIE6 M -N -N -D -T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E
uvig_413097_CDS_0005 L Q Y V R -E E ----Y G ----D -N -E -Y (85)
L + E
AcrIE6 L I E I L E E -Q Y P G H A A D L S -I K N L C P
uvig_413097_CDS_0005 2 AcrIE1 0.67 View Alignment uvig_413097_CDS_0005 M D K M ----D K -K ----------E -------T M R I K S I E R K A Y E V Y K E V D A L I D H L Q R E N V (60)
M+K + I A + + L+ + R +
AcrIE1 M E K K L S D A Q -V A L V A A W R K Y P D L R E S L E E A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R R -Q G
uvig_413097_CDS_0005 D W E I ----I D E L K S T R D A S C D V V D A L Q Y V R E E -Y G ---D -N -E Y (104)
+ R +V ++ YG
AcrIE1 L E -E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I -D R D V D
uvig_413097_CDS_0005 3 AcrIIC4 0.65 View Alignment uvig_413097_CDS_0005 M D K M -D K -K ---E ----------T -M -R I K S I E R K A Y E V Y K E V D A L I D H L Q R E N -V D W E I (60)
M + I + + D EN +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K -N H R E P I K G L F K S A V E Q F S S A R D F F K N E N Y S K E L A
uvig_413097_CDS_0005 I D E L K -S T -R D -A -S -C D V -V D A L Q Y V R E E Y G D N E Y (96)
K + + E G +
AcrIIC4 E K F N K E -A V N -E -A -V E K -L Q -K A I D L A E K Q G I Q -F
uvig_413097_CDS_0005 4 AcrIF25 0.58 View Alignment uvig_413097_CDS_0005 M D K M D ----K ----K ----E T -M -------------------R I K S I E R K A Y E V Y K E V D A (60)
MD D + R+ + EV E+ A
AcrIF25 M D N D D K K P D A L I H L R V P A E V -K G R W V K E S R L E G M K L T D W I T G R V E A K A L S I A E V L E E A A A
uvig_413097_CDS_0005 L I D H L Q R E N ---V ---D ---W E I I D E L K S T ---------R D A S -C -D V ----V D A L Q Y V -(120)
+ L I R +L+
AcrIF25 M A R S L E D S P I F Y R N K L C A D G I V T I Q Q Q A A R F S A A T D D A T R L D A A -L W -A R E G Y Q L L S S G L
uvig_413097_CDS_0005 ---R E E ---------------------------------Y -G --D N -E Y (169)
G
AcrIF25 P D S Y S G A V P N E G R T G W V T A S Q M A R L F G G E A L W I E R C Q Q E L G G A G K E D G R
uvig_413097_CDS_0005 5 AcrVA1 0.54 View Alignment uvig_413097_CDS_0005 M D K -M -------D K ---K ----E --------------T ---------------M ------(60)
M K
AcrVA1 M Y E A K E R Y A K K K M Q E N T K I D T L -T D E Q H D A L A Q L C A F R H K F H S N K D S L F L S E S A F S G E F S
uvig_413097_CDS_0005 ------R I -K -S -I ----E ---------------R K A -----Y -E -V Y K E V D A L I D -H L Q (120)
+ Y E+ I
AcrVA1 F E M Q S D E -N -S -K L R E V G L P T I E W S F Y D N S H I P D D S -F R E W F N F -A N Y S E L S E T I Q E Q -G
uvig_413097_CDS_0005 -R E N -V ----D ----W E I I D E L K S T R D -A -S C D V V D A L Q Y V R E E ---Y -G ---D --N E Y (179)
E+ E+ + + D+ L + EE
AcrVA1 L E L D L D D D E T Y E L V Y D E L Y T E A M G E Y E E -L N Q D I E K Y L R R I D E E H G T Q Y C P T G -F A R L R
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;