3D Structure for uvig_412799_CDS_0004 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.02 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_412799_CDS_0004 1 AcrIE6 0.76 View Alignment uvig_412799_CDS_0004 M -K I E E A I R -Y F E -R E L E K I E E A E A I E A S -A A E P D E E V L H A W S Y E R E A T N M A ----L M A L (60)
M E++ ++E+ + A ++ L
AcrIE6 M N N D T E V L E Q Q -I K A F E L L A D E L K D R L -P T L E I -L S P M Y T A V M V T Y D L I G K Q L A S R R A E L
uvig_412799_CDS_0004 R I I -L A R L M ----C P G -I ---D G (83)
L I
AcrIE6 I E -I L E E Q Y P G H A A D L S I K N L C P
uvig_412799_CDS_0004 2 AcrIE1 0.65 View Alignment uvig_412799_CDS_0004 M --K ---I E E A I R --------------Y ----F -E ----R E L E K I E E A E A I E A S A A -E P D (60)
M K + A+ +E + + A+ +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A S I -L -S L I V F Q A E T L S D Q A N E L A N Y I R R Q G
uvig_412799_CDS_0004 E E V L H A W S Y E R E A T N M A L M A L R -I ---I -L A R L M C P G I ---D -G (104)
E + ++ + +R+ I
AcrIE1 L E E A E G A C R N I D I M R A K W V E V C G E V N Q -H G I R V Y G D A I D R D -V D
uvig_412799_CDS_0004 3 AcrIIC4 0.63 View Alignment uvig_412799_CDS_0004 M -K I E -E A I R -----------------------Y F E R -E -L -E K I E -E A E -A I E A S A A E P (60)
M + E
AcrIIC4 M K I T S S N -F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S -A -V E -Q F S S -A R D F F K -N E N Y
uvig_412799_CDS_0004 D E E V L -H A W S Y E R E A T N M A L M A L R I I L A R L M C P G I -D G (98)
E++ + +EA N A+ L ++
AcrIIC4 S K E L A E K ---F N K E A V N E A V E K L Q K A I D L -A E K Q G I Q F
uvig_412799_CDS_0004 4 AcrIF23 0.55 View Alignment uvig_412799_CDS_0004 M -K I E E A I R ---------------------------------------------------(60)
M +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
uvig_412799_CDS_0004 ---------------Y F E R E L -E -K ---I E E A E A I E A S -----------A A E P D E E V L H A (120)
E A + S +
AcrIF23 G R A L T G T A R Q K E W A E K I R A E K V -Q Q M N Q D Q A E M A C D P S G L L T A A K F W I E N R N D S A Q E I A G
uvig_412799_CDS_0004 W S Y E R E A T N M A L M A L R --------I I L A R L M C P G I ---D -G (161)
+ A ++ + +A
AcrIF23 F V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I A A E Y N A L -T A R W G F
uvig_412799_CDS_0004 5 AcrIC3 0.55 View Alignment uvig_412799_CDS_0004 M -K -I E E A I -R ----------Y F E --------------------R -E L E -K I E E A E A -I -(60)
M + R +
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V -V A S S G Q V K F M A D K T D R G L E S R F L V P -E A G N R R I E V A L
uvig_412799_CDS_0004 E A S A A E P D E E V L H A W S Y E R E A T N M A L M A L R I I L A R L M C P G I D G (103)
+E + EATN L + A ++G
AcrIC3 T G R D L E A A N A L F S E L A A S V E A T N E M Y R E L D A E R A Q -I N K A L E G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;