3D Structure for uvig_412340_CDS_0010 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 94.16 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_412340_CDS_0010 1 AcrIE6 0.71 View Alignment uvig_412340_CDS_0010 M E L T K K D K K H I E E E V T K L M F R F N V E C T E Y A R -L Y E --R ----T ----Y -L E E L Q K K I G E K (60)
M D +E + E T + + K + +
AcrIE6 M N N ---D T E V L E Q Q I K A F E L L A D E L K D R L -P T -L E I L -S P M Y T A V M V -T Y D L I G K Q L A S R
uvig_412340_CDS_0010 I E F L E L Y A -H Q -Q -R K A S E N -N -E -N -K (88)
L + +
AcrIE6 R A E L I E I L E E -Q -Y P G H A A D L S I K N L C P
uvig_412340_CDS_0010 2 AcrIE1 0.65 View Alignment uvig_412340_CDS_0010 M -E L ---T K K D K ----K --------H -I E E E ----V ----T K ----L -M -F -R -F -N -V -(60)
M EE
AcrIE1 M E K K L S D A Q V A L V A A W -R K Y P D L R E -S -L E E A A S I -L S L I V F Q A E T -L -S -D -Q -A -N -E
uvig_412340_CDS_0010 E -C T E Y A R L Y E R T Y ---L E E L Q K K I G -E K -I -E F -L E L Y A H Q Q R K A S E N N --E -N -K (117)
Y+R + K E ++
AcrIE1 -L -A N Y I R R Q G L E E A E G A C R N I D I M R A -K W -V E -V C G E V N Q H G I R V Y G D A I D R D -V D
uvig_412340_CDS_0010 3 AcrIIC4 0.59 View Alignment uvig_412340_CDS_0010 M E L T K K D K -K -----------H ----I E E -----E -V -T K -L M F -R F N V -E C T -E Y A R --(60)
M +T + F+
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R -E P I K G -L -F K -S A V -E Q F S -S A -R D F F K N E N
uvig_412340_CDS_0010 L Y E R T Y L E E L Q -K K I G E K I E F L E L Y A H Q Q R K A S E N N E -N K (100)
Y + +E + + E +E L + E + +
AcrIIC4 -Y S K E L A E K F N K E A V N E A V E K L Q K A I D L ----A E K Q G I Q F
uvig_412340_CDS_0010 4 AcrIF23 0.59 View Alignment uvig_412340_CDS_0010 M E L ---T K -K --D -----K --------K ----------------H I --------------(60)
M
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L -S P R G I D A R A V A K T F
uvig_412340_CDS_0010 ------------------E E E V --------T -K -L -M -F R -F N V E -C T E Y A R L Y E R ---T (120)
E A+ +
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q -A -E -M -A -C D -P S G L -L T A A K F W -I E N R N
uvig_412340_CDS_0010 -Y L E -E L -Q K -K I G E K I E F L E L Y A ----H --Q Q -------R K A S E N N -E N --K (173)
E L + Q
AcrIF23 D S -A Q E -I -A G -F V M Q Q K A L L A Q H R S A K -A A G Q A D K V A K I A A E Y N A L T A R W G F
uvig_412340_CDS_0010 5 AcrIIA28 0.55 View Alignment uvig_412340_CDS_0010 M -E -L T K K D ----K -K H I ----E E E V T K L M F -R -F -N V -E C T -E Y A R L Y E R ----T Y L E E (60)
M TKK I E+ M + E
AcrIIA28 M K T I F T K K Q T E E L -L N D I S I E K Q K E L F N S M H D -F -R S -Q -H A K E A R I P G W S D K Y N K L E K K
uvig_412340_CDS_0010 L Q K K I G E K I E F L E -L -Y A H Q -Q R K -A -S E N N E -N K (95)
E S N
AcrIIA28 M L S D F E E V T G I K Y D -T L E S E L I W D N -L S N K F L Y N S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;