3D Structure for uvig_409934_CDS_0029 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.90 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_409934_CDS_0029 1 AcrIB1 0.71 View Alignment uvig_409934_CDS_0029 M I Q K Q -T -W -------------------------------------K ----D E I -R I L -I (60)
M +K+ K +
AcrIB1 M E S K N L R K L L N E Y E E I D I N E M L K N F R S I K N S G T K N D I E I F L H E K A I K F E K S S I S S T -Y V V
uvig_409934_CDS_0029 -I D -E Q N R G S V Q I A I P C Y --K ---C -N -I S -------------------G K A D A L I Y A L Y (120)
+ G +IA +S L+ L
AcrIB1 F S E D N E I L G Y F T I A N R S L V I P K E N F G -I L S K T Q Q K K L G N S A A I L K N G D L M T S S F L L G Q L G
uvig_409934_CDS_0029 V D S -S Y -R -R K G I A T ----K L -L -Q -L A E -H -Q -I K -L N G L Q I A G I E F D K E E S D R F V L D W (180)
L L + + +E + ++ +
AcrIB1 K N Y S D D I -E N L I T G R E L L T F -A -Y -D L F -L -K -I K -E L I N V K Y I W L E C Q N ---E P K L I S F
uvig_409934_CDS_0029 Y F R S G Y K P F S K ---R --S K L L I K K -L (206)
Y G K K+ I
AcrIB1 Y Q N F G F K M L E S L T S E E G L K V M I M E L K
uvig_409934_CDS_0029 2 AcrVA5 0.69 View Alignment uvig_409934_CDS_0029 M I Q K Q T W K D E I R I L I I D E Q N -R G S V Q I A I P C Y K C N I -S G K A D A L I Y A L Y V D S S Y R R K G I A (60)
M G + I ++ I + V + +R GI
AcrVA5 M K -I E -L ---------S ---G -G Y I C Y S I -------E --E D E V T I D M V E V T -T -K R Q G I G
uvig_409934_CDS_0029 T K L L Q L A E H Q I K L N G L Q I A G I E F D --K -E E S D R F V L D W Y F R S G Y K P F S K -R S -K L L I K K L (120)
+ L+ + ++ +G+ S ++++YF + +L +
AcrVA5 S Q L I D M V K D V A R E V -G L P I G L Y A Y P Q D D S I S Q E D L I E F Y F S N D F E Y D P D D V D G R L M -R W S
uvig_409934_CDS_0029 3 AcrIF5 0.40 View Alignment uvig_409934_CDS_0029 M I Q K Q T W K D E I R I L I I -D E -Q N R G S V Q I A I P C Y K -C N I S G K A D A L I Y A L Y V D S S Y R R K G I (60)
M ++ + + + +
AcrIF5 M S -------R P T V V T V T E T P R ----N ---P G S -Y E -V N V E R D G K M V V G R A R -A G ----S D
uvig_409934_CDS_0029 A T K L L Q L A E H Q I K L N G L Q I A G I E F D K E E S D R F V L D W Y F -R S G Y K P F S K R -S K L L I K K L (118)
++ A + G I S L K
AcrIF5 P G A A A A K A M Q M A M E W G S P N Y V I L G ----S ----N K V L A F -I --------P -E Q L R V K M
uvig_409934_CDS_0029 4 AcrVIA2_new 0.39 View Alignment uvig_409934_CDS_0029 M I ---Q K Q T W ---K D ------E -------------------------I R I L I ----I ---(60)
M QK + +
AcrVIA2_new M K N I H Q K I Q L N K L Q V K T V Q N K G K D L L I N A P T G S G K T E A S L L A V S D A S K S V S -Y L L P T V V S
uvig_409934_CDS_0029 -D ---------------------------E Q N R G -----S V Q I A I P C -Y K -C N I S -G K A D (120)
A+ D
AcrVIA2_new T -N V M Y L R L K R D Y K L N L S V Q T S T K K E I S N F A E G V H I K L E C P D F A L I D F I -K T G K -K T L G D
uvig_409934_CDS_0029 -A L I Y A L Y V D S S Y R R K G I -A -T K L -L Q --------------------------------- (180)
++ +
AcrVIA2_new T I I C D E F D H --Y ---P E M V -K S A -L M E Y K H T F S E T Q I I F V S A T L N K E S L M G I D L E E I A L D
uvig_409934_CDS_0029 ------------------------------------------------------------ (240)
AcrVIA2_new T E K N L I K Y K V Y P N D D F R M D D I I N N G K A Y G K K I G I I F N S I S Q L E C F I K P G E D F Y D D H F S K F
uvig_409934_CDS_0029 -------------------L A E --------H ---------Q I K L N G L Q I A G I E F D K E E S D (300)
LAE I+
AcrVIA2_new K K G E N D Y I I H S Q V D D Y D K A L A E N A I V N N D F S V L I G T D S I S Y S I D V N F D I L I M M A -S -S E M
uvig_409934_CDS_0029 R F V L D W Y F R S G Y -K P ------F --------------------------------------(360)
+ R
AcrVIA2_new A T N I Q R L G R C N R L N K H V T D Y N L Y F F G S Y L S D L K A P F I N E N V A F N N L E R I T S S H L C I S R K N
uvig_409934_CDS_0029 ------------------------------------------------------------ (420)
AcrVIA2_new I N E I K K E L P V S E I M E Y I E V K K H V L D E E E S L R P I P F K V R R G I E K E V V K F N A K G L K Q T K V I K
uvig_409934_CDS_0029 ------------------------------------------------------------ (480)
AcrVIA2_new T Y Q T F N M M D L K Y A F C E E Y Y Y D K K N S R A L D V I Q Q F D F E N D W F D R G D F T V K L Y N L K T E Q Q A L
uvig_409934_CDS_0029 --------------------------------------S --K ----------R -S K L L I - (540)
K +
AcrVIA2_new K Q L L L K L E E Y I E P E A P D E T D E D F Y Y R N P D I L L K Y T D Y D K L F -I K G W T Y S I L S I D G K T I -Y
uvig_409934_CDS_0029 K K L (543)
+
AcrVIA2_new -I A
uvig_409934_CDS_0029 5 AcrVIA1_Lse 0.39 View Alignment uvig_409934_CDS_0029 M I ---Q K Q T -----W ------K ---D E --------I --R I L I I --D E Q -N -R G S V Q I A I P (60)
MI K + + +
AcrVIA1_Lse M I Y Y I K D L K V K G K I -F E N L M N K E A V E -G L I T F L K K -A E F E I Y S R E N Y S K -Y N K W F E M W K S
uvig_409934_CDS_0029 C Y K C N I S G K A D A L I Y -A --L -Y V D S S Y R R K G I A T K L L Q L A E -H -Q I K -L N -G L Q I A G I E F (120)
+ K + GI +++ + + + +
AcrVIA1_Lse P T S S L V F W K N Y S F R C H L L F -V I E K -D G E C L G I ---P A S V F -E -S V L -Q I -Y L A D -P F A P -
uvig_409934_CDS_0029 D K E E S -D R F V L D W Y F R ----S G -Y -----------K P F -----------S K --R ------(180)
D E V Y + +
AcrVIA1_Lse D T K E -L F V E V C N L Y E C L A D V T -V -V E H F E A E E S A W H K L T H N E T E V S K R V Y -S K -D D D E L L
uvig_409934_CDS_0029 ------------------------------------------------------------ (240)
AcrVIA1_Lse K Y I P E F L D T I A T N K K S Q K Y N Q I Q G K I Q E I N K E I A T L Y E S S E D Y I F T E Y V S N L Y R E S A K L E
uvig_409934_CDS_0029 ---S K L L I K K -L (252)
+L
AcrVIA1_Lse Q H S K Q I L K E E L N
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;