3D Structure for uvig_407297_CDS_0006 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 91.31 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_407297_CDS_0006 1 AcrIB9 0.73 View Alignment uvig_407297_CDS_0006 M N N S I E T K K A E V R K N I K N T L E S A K I K I I N V I S V C P -D W E -V E D --V S L ---G -Y K S L S V -(60)
MN + + +NIK +E + + + S
AcrIB9 M N K F A F E N D K Y L E R N I K A V V E K I A R D F N L H L K S K Y S K D C E F T V V A D N -S F D N I E N S T I F L
uvig_407297_CDS_0006 Y L N L K G V -E R -D R -S L V I R Y Q A K A -G -N F Q E E S F D T N ---V -A -S C G E -F D L -L E A N D N L (120)
+ D + + Y + S +
AcrIB9 E I K R N D G K A C Q D -H H I Y A E Y E C D E D D N E Y I A ----L T V K F -Y -G S S A -S N Q -I N T -V Q G I
uvig_407297_CDS_0006 K Y Y T A I G D I -L N H ---K -------D M -L -S -M -L -K -D T --------M -V -Y F -T N K -L -(180)
K + ++ + +
AcrIB9 K S S K Y A S -C I V S -D T D N Q L S K S I H E L N -L -K -K -E -K E -Q Q E A W N K K -E -A E -Y A R -K K Q
uvig_407297_CDS_0006 -------V -E -L D -------K E ----Y D -K L -D -Q E D (217)
+ K
AcrIB9 A Y V S Q S Q R E -K Y -E D I F D L P F D F Y D Y I -D K K E Q G L -I
uvig_407297_CDS_0006 2 AcrIB2 0.64 View Alignment uvig_407297_CDS_0006 N /A (3)
N/A
AcrIB2 N /A
uvig_407297_CDS_0006 3 AcrIIA5 0.63 View Alignment uvig_407297_CDS_0006 M N N S I E T -K ---K --A E V R K N -I K N T L E S A K I K I I N V I S V C P D W E V E D -----V S -L -G Y (60)
M K + + ++ + W +
AcrIIA5 M A Y G K S R Y N S Y R K R S F N R S N K Q -R R E Y A Q E M D R L E K A F E N L D G W Y L S S M K D S A Y -K -D F G
uvig_407297_CDS_0006 K S L S V Y L N L K G -----V -E R D R S L V I R Y Q A K A G N F Q E E S F D T N V A S C G E F D L L E A N D N L K (120)
K N L++ A +
AcrIIA5 K Y E I R L S N H S A D N K Y H D L -E N G R L I V N I K A -S -K ------------L ---N F V -------
uvig_407297_CDS_0006 Y Y T A I G D I L N H K D M L S M L K D T M V -Y F -T N --K -L V ---E L D -K ----E ----Y D K L D Q E -(180)
+ + + + + + L K E
AcrIIA5 --D I ----I E -N K L -D K I I E K I D K L -D L D K Y R F -I N A T N L -E -H D I K -C Y Y K G F K T K K E V
uvig_407297_CDS_0006 D (181)
AcrIIA5 I
uvig_407297_CDS_0006 4 AcrIIA11 0.58 View Alignment uvig_407297_CDS_0006 M N -N S I E T K ---K A E V R ---K ----N ---------I -K -N T ---L E S A K I K I I N V I S V -C (60)
M ++ + + L +KI ++
AcrIIA11 M A D M T L R Q F C E R Y R K -G D F L A K D R E T Q I E A G W Y D W -F -C D -D K A L A G R L A K I W G I L K G I T
uvig_407297_CDS_0006 P D W E ----V ----E D V S L -----G Y K S L S V Y L N L K G V E R D R S L V I R Y Q A K -A G N F Q E E S F (120)
D Y + L RD E
AcrIIA11 S D Y I L D N Y R V W F K N N -C -P M V G P L Y D D V R -F E P L D E E Q R D E L Y F G V -A -I D D K -R R E K K Y
uvig_407297_CDS_0006 --D T -N V A ---S C G E -------F --D L -L E A N -D N L K Y -Y T A I G D I L N H ---K D M L S M L K (180)
T + + D L +
AcrIIA11 V I F T A -R N D Y E N E C G F N N V R E V -R Q --F I N G W E D E L -K N ------E E F Y K A R E K K R Q E M E
uvig_407297_CDS_0006 D T M V Y F T N K L V E L D K E Y D K L D Q E D (204)
+ F +D ED
AcrIIA11 E A N N K F A E I M Q R A D E I L W N -L K E D
uvig_407297_CDS_0006 5 AcrIF4 0.58 View Alignment uvig_407297_CDS_0006 M N N S I E T K K A E V R K N I K N T L E S A K I K I I N V I S V C P D -W E V E D V S L G Y K S L S V Y L N L K G V E (60)
M + K + I + + V +
AcrIF4 M M T I ---S K T D ----I D C Y --------L ---Q ----T ------------Y V V I D P V ---S
uvig_407297_CDS_0006 R D R S L V I R Y -Q A -K A G N F Q E E S F D T N V A -S C G E F D L L E A N D N L K Y Y T -A I G D I L N H K D M L (120)
+ G G + +E + K+
AcrIF4 N -G W Q W G I D E N -G V G G A ---L -------H -H G R V E M V E G E N G Y --F G L R G A T H P T E K E A M
uvig_407297_CDS_0006 S M L K ----D T M V Y F T N K L V E L D -K -E -Y D K L D Q E D (155)
+ + +K
AcrIF4 A A A L G Y L W K C R Q D L V A I A R N D -A -I -E A E K Y R A K A
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;