3D Structure for uvig_397243_CDS_0030 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.94 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_397243_CDS_0030 1 AcrIIA33 0.75 View Alignment uvig_397243_CDS_0030 M I K W N G K S T N G A W E K E I I A N D Y E D L L E T M V D K G I C D G Y W N I D S Q A Y N E L C F Y S E K L E K L R (60)
MIKW+GKST W + + A Y LLET VDKG Y DSQ+ EL S +
AcrIIA33 M I K W T G K S T D K G W I R T V E A E T Y Y K L L E T L V D K G Y I G D Y I D S D S Q L F H E L A Y V S ---P A V A
uvig_397243_CDS_0030 D -E Y Q E -A I E E D D D E K M A N F E K Q L D D I D W H E E I F S K L T D N Q F E Q V I R G I D G M A Y Y Q E F E E (120)
+ + D+ + L+ D +F KLTD+QF ++I G AYYQEFE
AcrIIA33 -D L -E D R L -N --D E H Q V E Q A L E D L E N F D -W N R V F E K L T D Q Q F Q T A I A G C T S Q A Y Y Q E F E V
uvig_397243_CDS_0030 V E D (123)
+
AcrIIA33 -I E
uvig_397243_CDS_0030 2 AcrIIC5 0.61 View Alignment uvig_397243_CDS_0030 M I --K -W N G K S T N G A W E K E I I A N D Y E D L L E T M V D K G I C D G Y W N I D S Q A Y N E L C F Y S E K L E (60)
M + G + + N E + + I D K
AcrIIC5 M N N S I K F H V S -Y D G T -A R A -L F N T K E Q A E K Y C L V E E I N D E M N G ----------Y ---K R K
uvig_397243_CDS_0030 K L R D -E Y -Q -E -A -I -E -E -D D -D E K M A N F E -K Q L D D -I D W H E E I F S K ----------L T (120)
+ K+ I +
AcrIIC5 ----S -W E -E -K -L -R -E -E -N C A -S V Q D W V E K N Y T S S Y S D L F N I C E I E V S S A G Q L V K I D
uvig_397243_CDS_0030 D N Q F E Q V I R G I D G M A Y Y Q ---E ----------F -E E -V E D (160)
+ + + G E F E
AcrIIC5 N T E V D D F V E N C Y G F T L E D D L E E F N K A K Q Y L Q K F Y A -E C E N
uvig_397243_CDS_0030 3 AcrIF13 0.59 View Alignment uvig_397243_CDS_0030 M I K W -N G K S T N G A W E K E I I A N D Y E D L L E T M V D K G I C D G -Y W N I D S Q A Y N E -L ------C F (60)
M + + Y
AcrIF13 M K L L N I K I -N -E F A -V T A N T E -----------A -G D -E L Y -L Q L P H T P D S Q H S I N H E P -L
uvig_397243_CDS_0030 Y -S -E K L E K L R D E Y Q E A I E E D D D E K M A N F E K Q -L D D I D W -H -E E I F -S K L -T D N Q F E Q V I (120)
+ + + + E D A + E T N+ +Q +
AcrIF13 D D -D D F V K E V Q E I C D E Y F G K G -D R T L A R L S Y A G -G Q A Y D S -Y T E -E D G V -Y T T N T G D Q F V
uvig_397243_CDS_0030 R -G I D G M A Y Y Q -E --F E E V E D (141)
++
AcrIF13 E H S Y A D Y Y N V -E V Y C K A D L -V
uvig_397243_CDS_0030 4 AcrIIA26 0.59 View Alignment uvig_397243_CDS_0030 M I K W N G --K S -T N -G A ---W E K E I I A N D ---Y E D L L E T M V D --------K -----G -I -C (60)
M K + N + + ++ + VD
AcrIIA26 M K K L Y I Q T N Q F A N G E L Q V E N T S Y E L C D T F K E L Y S V A S N L V D E N T L N F V E D N F I E Q -N -Y K
uvig_397243_CDS_0030 D G ---Y -W N ---I D S Q A ----Y N E L -C -F Y S E K L E K L R D E Y Q E A -I E E D D D E K M A N F E K Q (120)
D E L + E D +E A +
AcrIIA26 D E Y N G -V Y E N D G D T G E F V G Q V F E N -K -V -T E E Q F K E L L E Q L E I T Y T E F D P E E E L A K C I A N
uvig_397243_CDS_0030 L D D -I -------D W -H -E E I F S K L T D N Q ----F ------------E -----Q -V -I -R G I (180)
E ++
AcrIIA26 K N R K S E F Y G N G L K -V -I A E Y L E S I S H E D A L A V V T Y Y Y F Y F G F G Y E -D Q L I S -D -I -K D D Q
uvig_397243_CDS_0030 D G M A Y Y Q E F E E V E -D (195)
+ + E E
AcrIIA26 E D G V K F E H V E R S E T I
uvig_397243_CDS_0030 5 AcrIB6 0.58 View Alignment uvig_397243_CDS_0030 M I K W N G K S T N G -A W E K E I I A N D Y E D L L E T M V D K G I C D G Y W N I D S Q A Y N E L C F Y S E K L E K L (60)
M K + + + + E ++
AcrIB6 M G K T Y W Y N E --G -T D T L L ---T E K E Y K E L -M E R -------------------------E -
uvig_397243_CDS_0030 -R D E Y Q E A I E E -D D D E K M A N F E K Q L D D I D W H -E E I F S -K -L -T D N Q F E Q V I R G I D G M A Y Y (120)
+ Y E+ E + + +
AcrIB6 A K A L Y E E V Q E -E ---------------E K D F E -S -S E K -T -S F E E F L K T C Y E N E S D F V L S
uvig_397243_CDS_0030 Q -E -F E E V E -D (131)
+E
AcrIB6 D N -E G N K L E E W
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;