3D Structure for uvig_396667_CDS_0030 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 87.93 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_396667_CDS_0030 1 AcrVA3 0.79 View Alignment uvig_396667_CDS_0030 M V K M S K V D W L S I D W T K N N R E L S V E L G K A Y N T V A K K R Y Q L G K S G K A E G -R -A V R I D K G I N N (60)
MV SK+DW SIDWTK+N + E G+AYNTV K R LGKS R DKGI+
AcrVA3 M V G K S K I D W Q S I D W T K T N A Q I A Q E C G R A Y N T V C K M R G K L G K S H -Q G -A -K S P R K D K G I S R
uvig_396667_CDS_0030 P N N A I G G K I S Q -P I A -M R A A K L S P K S G K F E T N I H A K K W R I V S P S N Q I F I V R N L Y Q F V R D N (120)
P+ + Q + AK+SPK G+FETN +AK W + SP N NL FVR N
AcrVA3 P Q P H L N R L E Y Q A L A -T -A K A K A S P K A G R F E T N T K A K T W T L K S P D N K T Y T F T N L M H F V R T N
uvig_396667_CDS_0030 S E L F L P K D V I F K -R Q G G K R G T G G E Y -C N A T S G L R Q A A -S S ---G R L W K G W K C K Q -I K D -K (180)
LF P DV+++ ++ +G E S ++ WKGW+ + KD K
AcrVA3 P H L F D P D D V V W R T K S -----N G V E -W -C R A S S G L A L L A K R K K A P L S W K G W R L I S L T K D N K
uvig_396667_CDS_0030 2 AcrIF16 0.52 View Alignment uvig_396667_CDS_0030 M V K M -S K V D W L S I ----D W -T K N N R E L S V E L G K A Y N T V A K K R Y Q L G K S --G K A E G R A V R -(60)
M K L NT+ K Y + + +A +
AcrIF16 M S L S D K K E Q K E A Y L D A L R I A P L D R G V L K R I H A V N D N T L D K W L Y V A D R Y P T F R A C W E L -W M
uvig_396667_CDS_0030 I D K G -I N N P N N ----A -I G G -K -I S Q -P -I A M R A A K L S P K S G K F -E -T N ----I ------(120)
+ R + + K+
AcrIF16 -F Q -R K -R -R V L I S R -K -L H V -L -I N R -S -T N R T I E A F E K T Y P -P -E E R V V G K -S Y R D L V
uvig_396667_CDS_0030 ---H --A -K -K -W R I V S P S N Q ---------I F I V R N L Y Q F V R D N S E L F L P K D V I F K R Q G G (180)
+ + + + + L +
AcrIF16 T E K G E R S A -N -M Y I -I --N G E V V G A K D A S I L L G Y S S Y N T L Y A K M K R L G I -----------
uvig_396667_CDS_0030 K R -G T G G E Y C N A T S G L R -Q A A S S G R L W K G W K C K Q I -K D K (219)
+ L+ +
AcrIF16 Q P G --D -D I S H ----L K P -----E -----K R -G R K K E C S
uvig_396667_CDS_0030 3 AcrIIA33 0.45 View Alignment uvig_396667_CDS_0030 M V K M S --K --V -D -W L S I D W T K N N R E L S V E L G K A Y N T V A K K R Y Q L G K S -G K A ------E G (60)
M+K + + Y ++ G +
AcrIIA33 M I K W T G K S T D K G -W -I R T V E A E -----------T Y Y K L L E T L V D K G Y I G D Y I D S D S Q L F H
uvig_396667_CDS_0030 R A V R -------I -----D -------K G -I -N N P N N A I G G K I S Q P I A -M -R -A A K -L S -P K (120)
++ N ++ +
AcrIIA33 E L A Y V S P A V A D -L E D R L -N D E H Q V E Q -A -L E D L E N F D W N R V F E K L T D -Q -Q -F Q T -A I A G
uvig_396667_CDS_0030 S G K F E T N I H A K K W R I V S P S N Q I F I V R N L Y Q F V R D N S E L F L P K D V I F K R Q G G K R G T G G E Y C (180)
+++ + +
AcrIIA33 ---C T S Q A Y Y Q E F E V ---------------------------------------------
uvig_396667_CDS_0030 N A T S G L R Q A A S S G R L W K G W K C K Q I K D K (207)
I
AcrIIA33 -----------------------I --E
uvig_396667_CDS_0030 4 AcrIIC7 0.45 View Alignment uvig_396667_CDS_0030 M V K M S K V D W L S I D W -T K N N R E L S V E L G K A Y N T V A K -K R Y Q L G K S G -K A E G -R A V R -I -D K (60)
M K ++ +
AcrIIC7 M -N -V I E -A E K F L K P -K ----------T N T ---T -T -----F -K F L -V D E K -L T A N -L -T
uvig_396667_CDS_0030 G I N N P N N A I G G K I S Q P I A M R A -A K L S P -K S G K -F E -T -N I H A K K ------W R I -V S -P -S (120)
G IG I +A
AcrIIC7 G M ----K P I G R -I ------D -T -----Q -R --F -L E -S -H R A S E F K I L L D N P -L K -E -L -
uvig_396667_CDS_0030 -N Q I F I V R N L Y Q F V R D N S E L F L P K D V I F K R Q G G K R G -T G G E Y C N A T S G L R Q A A S S G R L -W (180)
+ + Y ++ L + K R G L +A
AcrIIC7 L -N Y Y -G L T Q Y Y L Q K E V ---G L S Q S T V S K L I S D N R P I -G S ---F Q F A V L L K I A E A T N R S V
uvig_396667_CDS_0030 K G ---W K --C K -Q I K D K (197)
++D
AcrIIC7 G E V A D Q -L K E F N D L R D A
uvig_396667_CDS_0030 5 AcrIIA32 0.45 View Alignment uvig_396667_CDS_0030 M V K M S K V D W L S I -D W T K N ----N R E L S -V E L G K -A Y N T V A K K R Y Q L G K S G K A E G R A V R I -(60)
M K + R + + + Y E +
AcrIIA32 M -K N E -D -G K L V V -S K A H F G N M I R N C -Q -S V E -D F K K S F E R L T Y -Y S S E -N R E S T V R Q R L
uvig_396667_CDS_0030 D K G -I -N N P -N N A I G G K I S Q P I A M R A A K L -S P K S G K F ----E -T N I H -A K K W R I V S P -S -(120)
N G + +
AcrIIA32 K -I A -E K -E Y -N F K A G V K E D L -E ---I -K N -T ----T D K E I -L D Y V -R N E -------L -S
uvig_396667_CDS_0030 N -Q I -F I V R N L Y Q F V R D N S E L F L P K D V I F K R Q G G -K R G T G G -E Y C N A T S G L R Q A A S S G R L (180)
I ++ N E R + L +
AcrIIA32 -K -I D S K K Q A D K N W S E K N R E H R N -Y L S K --R -S S A R S F I --N -N N A T H E D L L E L K ----K
uvig_396667_CDS_0030 W K G -W K C -K -Q -I K D K (196)
K
AcrIIA32 ---I I --E -E -K -L -K
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;