3D Structure for uvig_395245_CDS_0016 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 89.44 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_395245_CDS_0016 1 AcrIB1 0.85 View Alignment uvig_395245_CDS_0016 M L L D D K V E F K K I S N -I D D K E -R A -L V E A F ---S S --G K D H I D S Y L K N E A L E D L Q Y G I T K T (60)
M +K+ N ++ + + F + K I+ L+ A+ I+ T
AcrIB1 M E S K ---N L R K L L N E Y E E I D I N -E M L K N F R S I K N S G T K N D I E I F L H E K A I K F E K S S I S S T
uvig_395245_CDS_0016 Y L M F V T P K G K E T Y L L G F F S L T T D R V L I T K --K S K ----L Q D L L T N W K -N P -V -Y R K S I P G (120)
Y+ F ++ +LG F++ + ++I K Q L N
AcrIB1 Y V V F S -E ---D N E I L G Y F T I A N R S L V I P K E N F G I L S K T Q Q K K L G N S A A I L K -N G D L M T S S
uvig_395245_CDS_0016 I Q I H H F A V N G P Y Q --A -Q H L G Q E M M Y Y A F L F I K T A L L S N I G A C L I T V Q S --E P D V R A F Y E (180)
+ N G E A + I + I + EP + FY
AcrIB1 F L L G Q L G K N Y S D D I E -N L I T G R E L L T F A Y D L F L K -I K E L I N V K Y I W L E C Q N E P K L I S F Y Q
uvig_395245_CDS_0016 S L G F C H T G Q V --R -D S N V S M A I P T N E F F I D (210)
+ GF ++ + M+
AcrIB1 N F G F K M L E S L T S -E E G L K V M I ---M -E L -K
uvig_395245_CDS_0016 2 AcrVA5 0.56 View Alignment uvig_395245_CDS_0016 M L L D D K V E --F K K I S N I D D K E R A L V E A F S S G K -D H I D S Y L K N E A L E D L Q Y G I T K T Y L M F V (60)
M ++ I
AcrVA5 M K I E L S G G Y I C Y S I ------------------E -------------------E -------
uvig_395245_CDS_0016 T P K G K E T Y L L G F F S L T T D R V L I T K K S K L Q D L L T N W K N P V Y R K S I P G I Q I H H F A V N G P Y Q A (120)
++I V+
AcrVA5 --------------------------------------------D E V T I D M V E V T -T -K R
uvig_395245_CDS_0016 Q H L G Q E M M Y Y A F L F I K T A L L S N -I G A C L I T V Q -S -------E P D V R A F Y E S L G F C H T G Q V (180)
Q +G+ + I + D+ FY S F
AcrVA5 Q G I G S Q L I D M V K D V -A R E ----V --G L P I G L Y A Y P Q D D S I S Q E D L I E F Y F S N D F E Y D P D D
uvig_395245_CDS_0016 R D S N V S M A I P T N E F -F I D (198)
+
AcrVA5 V -D G -R -L --M ---R -W S
uvig_395245_CDS_0016 3 AcrIC11 0.41 View Alignment uvig_395245_CDS_0016 M L L D D K V E F K K I S N I D D -K E R A L V E A F -S S -G K D H I D S Y L K N E A L E D L Q Y G I -T -K T Y L M (60)
M + + + + K + + + + +L + I +
AcrIC11 M N K E T Q I T A S A V V -G E -D K R L E F L S K H F G V R F A R R G E A L V F A W L L R L A K V P I E W T R L Q Y Y
uvig_395245_CDS_0016 F V T P K G K E T Y L L G F F S L T T D R V L I T K K S K L Q D L L T N W K N P V Y R K S I P G I Q I H H F A V N G P Y (120)
+ GF + + I +
AcrIC11 T L -S --N ----S G F Y L A -P --------------R ------------E -L R I S E C E L ----
uvig_395245_CDS_0016 Q A Q H L G Q E -M M Y Y A F L F I K T A L L S N I G A C L -I -T V Q S ----E ----P -----------D V (180)
+ + + S E
AcrIC11 -S A D A V -G I -V A T M L T L -R -----Q -----L -A -H E S A A C V E A D S T Y P A A K L A V T A S V K F
uvig_395245_CDS_0016 R A F Y E S L G F C H T G Q V R D S N V S M A I P -T -N E F F I D (214)
Y L + + + D
AcrIC11 A Q Q Y H H L A A -Y S V K -H A E ---S I N -I -Y -R A I -D
uvig_395245_CDS_0016 4 AcrVIA1_Lse 0.39 View Alignment uvig_395245_CDS_0016 M L -L -D D K -V E F K K I S N ---I D D -K E R A L V ----E A --F S S G K D H I D S -Y L K -N -E A -L -(60)
M+ D KI + F
AcrVIA1_Lse M I Y Y I K D -L K V K G K I F E N L M -N K E -A V E G L I T F L K K A E F E I Y S R E N Y -S K Y -N -K W -F -E
uvig_395245_CDS_0016 E D -L Q Y G I T K T Y L M F V T P K G K E T Y L L G F -F S -L -T T D R V L I T K K S K L Q D L L T N W K N P V --(120)
+ + + L S +L+
AcrVIA1_Lse -M W -K S P T S S L V -F W K -N ----Y S F R C H L L F V I E K D G E C L G I P A S V F E S V L Q I Y L A D P F A
uvig_395245_CDS_0016 Y -R K S ------------I P -G -I Q -I H H F A V N G P Y Q A Q H L G Q E M M Y Y A F L F I K T A L L S N I (180)
+ + + HF + + +
AcrVIA1_Lse -P D T K E L F V E V C N L Y E C L A D -V -T V V E H F E A -----E E ----S A W H K L T H N E -----T -E
uvig_395245_CDS_0016 G A C L I T V Q S E -------P -----D V R A F Y E S --L G F C H T -G Q -V ----R -D S --------(240)
+ + + G +
AcrVIA1_Lse V S K R V Y S K D D D E L L K Y I -P E F L D T I A T N K K -S Q K -Y N Q I Q G -K -I Q E I N K E I A T L Y E S S E
uvig_395245_CDS_0016 --------------N V S M -A I P T N E F F -I -D (271)
++ +
AcrVIA1_Lse D Y I F T E Y V S N L Y R E S A K L E Q H S K Q I L K E E L N
uvig_395245_CDS_0016 5 AcrIIA28 0.38 View Alignment uvig_395245_CDS_0016 M L L D D K V E F K K I S N -I D D K E R A L V E -A -F -S S G K D H I D S Y L K N E A L E D L Q Y G I T K T Y L M F (60)
M E +
AcrIIA28 M K --T I F ---T K K -Q --------T E E -L -L N D -----------------------I ----
uvig_395245_CDS_0016 V T P K G K E T Y L L G F F S L T T D R V L I T K K S K L Q D L L T N W K N P V Y R K S I P G I Q I H H F A V N G P Y Q (120)
AcrIIA28 ------------------------------------------------------------
uvig_395245_CDS_0016 A Q H L G Q E M M Y Y A F L F I K T A L L S -N I G A C L I T V Q S --------E -P -D V R A F Y E S L G F C H T (180)
E ++ + + E + +
AcrIIA28 S I E K Q K E L F N S M H D -F R S ----Q -H A -K E A R I P G W S D K Y N K L -E -K K M L S D F E E V T G I K Y
uvig_395245_CDS_0016 G Q V R D S N V S M A I P T N E F -F I D (201)
++ S + +N F
AcrIIA28 D T L E -S E L I W D N L S N K F L Y N S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;