3D Structure for uvig_395041_CDS_0033 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.47 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_395041_CDS_0033 1 AcrIE1 0.71 View Alignment uvig_395041_CDS_0033 M Q M T I Q E I K N A I K Y N E L N N I E T L Q A T Y T G I K H -N -N -D -G -I -I Q T L G -Y D D L S N I V M M L (60)
M + + + + + ++
AcrIE1 M E K K ---L S D -A Q V A L V A A W R K Y P D L R E -S L E E -A -A -S -I -L -S L I V F -----Q A E T L S
uvig_395041_CDS_0033 R Y I A E K C E L L R Q R T N -S I Y D A F A A F N L ----R E T I F D T I D E Y Q Q E -M N N Q I R Q I V A A -R (119)
+ E +R + A + + + I
AcrIE1 D Q A N E L A N Y I R R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R ---D V D
uvig_395041_CDS_0033 2 AcrIE6 0.58 View Alignment uvig_395041_CDS_0033 M Q M T I Q E -I K N A I K Y N E -L N N I E T L -Q A T Y T G I K H -N N D G I I Q T L G -Y D D L S N I V M M L R Y (60)
M+ + ++ + + + D + TL M
AcrIE6 M N ---N -D -T E V L ----E -Q ---Q -I -K A F E L L A D E L K D R -L P T L E I L ------S P M Y T A
uvig_395041_CDS_0033 I A E K C E L L R Q R T N S I Y D A F A A F N L R E T I F D T I D E Y Q Q E M N N --Q I R Q -I V A -A -R (115)
+ +L+ + R + + ++E I +
AcrIE6 V M V T Y D L I G K Q L A ---------S R R A E L I E I L E E Q Y P G H A A D L ----S I K -N L C P
uvig_395041_CDS_0033 3 AcrIC3 0.57 View Alignment uvig_395041_CDS_0033 M Q M T I -Q E I K N A I K -Y N E L N -N I E -T L -Q A T Y T G I K -H N N D G I I Q T L G -Y D D L S N I V M M L (60)
M+ ++ + + EL + + ++ G+ + +
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V -V A S -S -G Q V K F M A D K T D R G L E S R F L V P E A --G N R R I -
uvig_395041_CDS_0033 R Y I A E K -C -E L L R Q R T N S I -Y -D A -F A A F N L R E T I F D T I D E -Y Q Q -E -M N -N -Q I R Q I V A (120)
+ N + A E + I ++
AcrIC3 --E V A L T -G -R D L E A A N A L F -S -E L A A ---S V E A T N E M Y R -E L D -A -E R -A -Q -I N K A L E
uvig_395041_CDS_0033 A R (122)
AcrIC3 -G
uvig_395041_CDS_0033 4 AcrIF12 0.57 View Alignment uvig_395041_CDS_0033 M Q --M -----T I Q E I K N A I K Y ---N ---E -L N N I E T L Q A T Y T G I K H N N D G I I Q T L G Y D D L (60)
M + E + + L + + H + LG + +
AcrIF12 M A Y E K T W H R D Y A A E S L K R A E T S R W T Q D A -N L E W T Q L A L -E C A Q V V H L A R Q V G E E L G N E K I
uvig_395041_CDS_0033 S N I -V M M L R Y I A E K C E L L ----R Q R T N -S I Y D A F A A F -N -L -R -E ----T -I -F D T I D E Y (120)
I L I + + + ++ +A +
AcrIF12 I G I A D T V L S T I E A H S Q A T Y R R P C Y K R I T T A Q T H L L A -V -T -L -L -E R F G -S -A -R R V A N A
uvig_395041_CDS_0033 Q Q -E M N N Q I R Q I V A A R (136)
I Q +
AcrIF12 V W Q L T D D E I D Q -A K -A
uvig_395041_CDS_0033 5 AcrIIA11 0.56 View Alignment uvig_395041_CDS_0033 M -Q M T I Q E I K N A I -K ----Y ---------N E L N N I E T L Q A T Y T G I -K H -N -N D G -I I Q -T (60)
M MT+ K A G +
AcrIIA11 M A D M T L R Q F C E R Y R K G D F L A K D R E T Q I E A G W Y D W F C D D K A L A G R -L -A K -I -W G I -L K G -
uvig_395041_CDS_0033 -L -G Y D D L S N I -V -M M -L -R Y I A E K C E L L ---R Q -------------------------- (120)
I C +
AcrIIA11 I -T S D ----Y I L -D N -Y -R V W F K N N C P M V G P L Y D D V R F E P L D E E Q R D E L Y F G V A I D D K R R
uvig_395041_CDS_0033 ------------------------------R T N -S I -Y D ---A F A A -F -N L R -E -T -I -F (180)
A +
AcrIIA11 E K K Y V I F T A R N D Y E N E C G F N N V R E V R Q F I N G W E D E -L K N E E F Y K A -R -E K -K R -Q -E -M -
uvig_395041_CDS_0033 -D T I D E Y Q Q E M N N ----Q -I -R Q I V A A R (208)
+ + E + ++
AcrIIA11 E E -A N N K F A E I M Q R A D E -I -L W N L -K E D
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;