3D Structure for uvig_392939_CDS_0022 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 89.45 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_392939_CDS_0022 1 AcrIE6 0.73 View Alignment uvig_392939_CDS_0022 M Q E R E R L I K V T H L Q M K H Q N L L G Q I E A Y D K T L K E I K Y T R D L Y N K H L S M N N E D A F A G L E -M V (60)
M QI A + + +D V
AcrIE6 M -N ----N D T E V ---L ----E Q Q I K A F E L L A D ---E L K D R L P T L E I -L ----S P M -Y T A V
uvig_392939_CDS_0022 E D E I T E K I K K -A I K D F -Q A V S K E I D K L N G V E R D D K V T D L T E W R K V N Q (107)
K E+ + ++ DL + +
AcrIE6 M V T Y D L I G K -Q ----L A -S R R A E L I E I L E E Q Y P G H A A D L -S I K N L C P
uvig_392939_CDS_0022 2 AcrIE1 0.70 View Alignment uvig_392939_CDS_0022 M Q E R E R ----L I K ----V T H L Q -M -K -H Q N -L L G Q I E A Y D K T L K E I K Y T R D L Y N K H L S M N (60)
M E+ + + + + L + + + + D N ++
AcrIE1 M -E K -K L S D A Q V A L V A A W R K Y -P -D -L R E -S L E E A A S I L S L I V F Q A E T L S D Q A N E L A N Y I
uvig_392939_CDS_0022 N E D A F -A -G -L -E M V E D E I T E K I K K A I K D F Q A V S K E I D K L N G V E R -D D K V T D L T E W R K V N (120)
+ + I + V E+ R
AcrIE1 R ----R -Q -G -L -E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V -Y G -D ----A I D R -D V
uvig_392939_CDS_0022 Q (121)
AcrIE1 D
uvig_392939_CDS_0022 3 AcrIIC4 0.59 View Alignment uvig_392939_CDS_0022 M Q E R E R L I K V T H L Q M K H Q N L L G Q I E A Y D K T L K E I K Y T R D L Y N K H L S M N -N E D A F A -G L E -(60)
M + + L
AcrIIC4 M -K -I --T -S S N F A -T ------I A T ---------------------S E N -F A K L S V -L P K
uvig_392939_CDS_0022 M V E D E I T E K I K K A I K D F Q A V S K E I D K L N G -V E R ----------D D K -V ---T ----D L -T (120)
+ I K A+ F+ + + V +
AcrIIC4 N H R E P I K G L F K S A V E Q F S S A R D F F K -N E N Y S K E L A E K F N K E A V N E -A V E K L Q K A I D L -A E
uvig_392939_CDS_0022 E -W R K V N Q (128)
+
AcrIIC4 -K Q G I -Q F
uvig_392939_CDS_0022 4 AcrIC3 0.56 View Alignment uvig_392939_CDS_0022 M Q E R E R --L --I K ---V -T H L Q M K H Q N -L L G Q I E A Y D -K -T L K E I K Y T R D L Y N K -H -L S -(60)
M + + L GQ+ T
AcrIC3 M -S -I Q V T S T N G R T V N L E I E L G S V V A -S S -G Q V K F M A D -K T -------D R G L E S R F L -V P
uvig_392939_CDS_0022 M N N E D A F --A G L -E -----M V E D E I T E K I K K A I K D F Q A V S K E I D K L N G V E R D D K -V -T D L (120)
G + E + + + A + +
AcrIC3 -------E A -G -N -R R I E V A L T G R D L E A A N A L F S E L A A S V E A T N E M Y R E L D A E -R -A -Q I
uvig_392939_CDS_0022 T E W R K -V N Q (129)
+
AcrIC3 N K A --L -E G
uvig_392939_CDS_0022 5 AcrIF23 0.56 View Alignment uvig_392939_CDS_0022 M Q E -R E R L -I K ------------V T H -L Q ---M -------------K H ----------Q N (60)
M+ L +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L --E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K -
uvig_392939_CDS_0022 -L L ------------G Q I E A Y D K T L K -E I K Y T R D L Y N K H L S M N -N E D A F A G L E M V E D E I T (120)
+E A +
AcrIF23 T F -G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P -S G L -L T A A K F W I E N R N D S A
uvig_392939_CDS_0022 E K I K K A I K D F Q A V S K E I D K L N G V E R D D K V ----T D L T E W R K V -N Q (165)
I + A+ + + DKV + +
AcrIF23 Q E I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I A A E Y N A L T A R W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;