3D Structure for uvig_392890_CDS_0068 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.67 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_392890_CDS_0068 1 AcrIB1 0.83 View Alignment uvig_392890_CDS_0068 V N T Y D I E P I Q K -D F ---P Y -D -I S S F ---D C --G N E A L N L F L S E H L Q R Q D E K Q I L R G Y V Y (60)
+ + + + +F + +FL E++ + + +I YV
AcrIB1 M E S K N L R K L L N E Y E E I D I N E -M L K N F R S I K N S G T K N D I E I F L H E K A I K F E K S S I S S T Y V V
uvig_392890_CDS_0068 L E Y G S G L P K V L G F F T L A G G -S F E R -S --R F P S K S Q Q K K I ---P ------Y T N T P C I I L G R (120)
+LG FT+A SK+QQKK+ T +LG
AcrIB1 F S E ---D N E I L G Y F T I A N R S L V I P K E N F G I L S K T Q Q K K L G N S A A I L K N G D L M T S S F L L G Q
uvig_392890_CDS_0068 L A V D K T I -Q -R Q G I G E M L V V K A A K I V L Q S A N A I G L H G M F V D A -K N D D A C K F Y E N L G F T R L (180)
L + G L+ A + L +I ++ +++ + FY N GF L
AcrIB1 L G K N Y S D D I E N L I T G R E L L T F A Y D L F L K I K E L I N V K Y I W L E C Q N E P K L I S F Y Q N F G F K M L
uvig_392890_CDS_0068 I G D ---N E N L F F Y P T S K I A Q -L P (203)
+ L
AcrIB1 E S L T S E E G L ------K V M I M E L K
uvig_392890_CDS_0068 2 AcrVA5 0.57 View Alignment uvig_392890_CDS_0068 V N T -Y D I E P I Q K D F -P Y D I S S F -D C G N E A L N L F L S E H L Q R Q D E K Q I L R G Y V Y L E Y G S G L P (60)
+ + I
AcrVA5 M K -I E -L ---S ---G -G Y I C Y S I -----------E -------------------------
uvig_392890_CDS_0068 K V L G F F T L A G G S F E R S R F P S K S Q Q K K I P Y T N T P C I I L G R L A V D K T I Q R Q G I G E M L V V K A A (120)
+ + + V T RQGIG L+ +
AcrVA5 --------------------------E -----D E V T I D M V E V T -T -K R Q G I G S Q L I D M V K
uvig_392890_CDS_0068 K I V L Q S A N A I G L H G M F V D A ----K ---N D D A C K F Y E N L G F T R L I G D N E N L F F Y P T S K I A Q (180)
++ + G + A ++D+ FY + F D +
AcrVA5 D V A R E -V ---G -L P I G L Y A Y P Q D D S I S Q E D L I E F Y F S N D F E Y D P D D V D -G -----R L M -R
uvig_392890_CDS_0068 L P (182)
AcrVA5 W S
uvig_392890_CDS_0068 3 AcrIC11 0.41 View Alignment uvig_392890_CDS_0068 V N T ---Y D I E P I Q K D F P Y D I S S F ---D -C -G -N E A L N L F L S E H L Q R Q D E K Q I L R G Y V Y L -(60)
N + S E L+ + R E + + L
AcrIC11 M N K E T Q I T A -----------S A V V G E -D -K -R L E F L S K H F G V R F A R R G E A L V F -A W L -L R
uvig_392890_CDS_0068 E Y G S -G -L P -K V L G F F T L A -G G S F E R S R F P S K S Q Q K K I P Y T N T P C I I L G R L A V D K T I Q R Q (120)
L TL G + +
AcrIC11 L -A K V P I E -W T R L Q Y Y T L S N S G F Y L A -P -----------R ---E -L R I S E C E ---L ----
uvig_392890_CDS_0068 G I G E M L V V K A A K -I V L Q S A N A I G L H G M -F V D A -----------K ----------N D D A C K (180)
+V + L+ +
AcrIC11 --S A D A V G I -V A T -M L T L R ------Q L A ----H E S A A C V E A D S T Y P A A K L A V T A S V K F A Q
uvig_392890_CDS_0068 F Y E N L G F T R L I G D N E N L F F Y P -T S K I A Q L -P (211)
Y L + I +
AcrIC11 Q Y H H L A A Y S V K -H -A -E ----S -I N I Y R A I D
uvig_392890_CDS_0068 4 AcrVIA1_Lse 0.38 View Alignment uvig_392890_CDS_0068 V N -T -Y D ---I E -P I Q K D F P ---------------Y D I S S F D C G N E A L N L F L S -E -H L -Q (60)
D I + F+ +
AcrVIA1_Lse M I Y Y I K D L K V -K G K I F E -N L M N K E A V E G L I T F L K K A E ---F E I Y S R E N Y S K Y -N -K W -F -
uvig_392890_CDS_0068 -R -Q D E K Q I L R G Y V -Y L E Y G S G L P -K V L G F F T --L A -G G S --F E R S R F P S K S Q Q K K -I -- (120)
+ G P S +
AcrVIA1_Lse E -M W -K S P T S S L V -F -W K N ---Y -S -F R C H L L F V I E K D G E C L G ----I P A -S V F E S V L Q I
uvig_392890_CDS_0068 ----P ----Y T -------N -------T -P C -I -I L G R L A V D K T I Q R Q -------G I G E -- (180)
++ + ++ +
AcrVIA1_Lse Y L A D -P F A P D -T K E L F V E -V C N L Y E C L A D -V -T V V E H F E A E E -S A W H K L T H N E T E V -S K R
uvig_392890_CDS_0068 -------M L V -V -K A A -K I V L -Q S A N A I G L H G M F V D A K -------N D D A C K F Y E N L G F -- (240)
L + L ++ N ++ YE+
AcrVIA1_Lse V Y S K D D D E L -L -K Y I -P E F -L D -T I A T N K K -S Q K Y N Q I Q G K I Q E I N K E I A T L Y E S S E D Y I
uvig_392890_CDS_0068 --T R L I G -D -N ----E N L F F Y P T S K I A Q -L P (271)
+ L + + L
AcrVIA1_Lse F T E Y V S -N -L -Y R E S A K L E Q H S K Q I L K E E L N
uvig_392890_CDS_0068 5 AcrVA2 0.38 View Alignment uvig_392890_CDS_0068 V N -T ----Y D I ---E -P ----I -Q K -D F --------P --------------Y D -------(60)
T K P
AcrVA2 M H H T I A R M N A F N K A F A -N A K D -C Y K K M -Q A W H L L N K P K H A F F P M Q N T P A L D N -G L A A L Y E
uvig_392890_CDS_0068 -------------------------I -S -S -F D C G N E A L ----N -L F L -S -E -------- (120)
E + +
AcrVA2 L R G G K E D A H I L S I L S R L Y L Y G A W R N T L -G -I -Y Q L D E E I I K D C -K E L -P -D D T P T S I F L N
uvig_392890_CDS_0068 H -L -Q -R -Q D -E -K Q I -L R G Y V Y L E Y G S G -L -P -K V L G F F T L A G G S F E R S R F P S K S Q Q K K (180)
+ ++ GF+ + ++
AcrVA2 -L -P -D -W C -V -Y V D -I S S A Q I A T F D D G -V -A -K H I K G F W A I Y D I V E -M -N G I N H D V L D F
uvig_392890_CDS_0068 I -P Y T -N T P C I I -L G -R L A V D K T I Q -------R Q ------G I G E M L V ----V K A A K ----(240)
T + + ++ + L+ ++
AcrVA2 -V V D T D T D D N V Y V P -Q P F I L S S G Q S V A E V L D Y G -A S L F D D D T S N T L I K G L L P Y L L W L C V A
uvig_392890_CDS_0068 -I V L Q S A N A I -G L -H G M F V --D ----A -K N D D A C K F Y E N ----L G F -----------T -R (300)
++ + + E +G
AcrVA2 E P D I T Y K G L P V S -R E E L T R P K H S I N K -K -T G A F V T P S E P F I Y Q I G -E R L G S E V R R Y Q -S I
uvig_392890_CDS_0068 L -I G D -----------------------------------N -E N L F F Y P T S K I A Q -L P (358)
G + F +
AcrVA2 -I D G -E Q K R N R P H T K R P H I R R G H W H G Y W Q G T G Q A K E F R V R -W Q P A V F V N S G ---R V S S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;