3D Structure for uvig_390739_CDS_0032 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 85.58 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_390739_CDS_0032 1 AcrIE6 0.72 View Alignment uvig_390739_CDS_0032 M T M T R Y E I E R E L D S L Y K D L N I A H -N --A -D E Q T V C K V F ----N -T D ----T K N E A I R A I T (60)
M+ +E + + T+ + T + + +
AcrIE6 M N N D T E V L E Q Q I K A F E L L A ----D E L K -D R L P T L -E I -L S P M -Y -T A V M V T Y D L I G K Q L A
uvig_390739_CDS_0032 E E I D N Y E A I L D E M Y P T K H V N Y E R T A D K -P Y L C W (93)
IL+E YP + + LC
AcrIE6 S R R A E L I E I L E E Q Y P G H A A -D --L S -I K -N L C P
uvig_390739_CDS_0032 2 AcrIE1 0.56 View Alignment uvig_390739_CDS_0032 M T -M ---T R Y E I E --------------R -E -L -D -S ----L Y K D L N I A H N A D E Q T V C K V F (60)
M + + + +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E -E -A -A -S -I L S L I V F Q A E T L S D Q A N E L -A N Y I
uvig_390739_CDS_0032 ---N T D T K N E A I R A I T -E E I D N Y E A I L D E M Y ---P T K H V N Y E R T A D K P Y L C W (112)
+ A R I + E + V + +D
AcrIE1 R R Q G L E E A E G A C R N I -D I M R A K W V E V C G E V N Q H G I -R -V Y G D -A I D -R D -V D
uvig_390739_CDS_0032 3 AcrIF2-IC2 0.55 View Alignment uvig_390739_CDS_0032 M -T M T R Y E ---I E -R E L D S -------L ---Y K D L -----N I A H N A D E Q T V C K -V F -N T D T (60)
M T T + + + + D+++V T
AcrIF2-IC2 M A T K T A Q M I A Q Q H K -D T V A A C E A A E A I A I A K D Q V W D G E G Y T K Y T F D D N S V L I Q --S -G T T
uvig_390739_CDS_0032 K N -E A I R A I T E E I D N Y E A I L D E M Y P -T K H V N Y E R T A D K P Y L C W (103)
+ I Y LD+ ER ++
AcrIF2-IC2 Q -Y A M D A D D A D S I K G Y A D W L D D E A R S A E A S E I E R L L E S V E E -E
uvig_390739_CDS_0032 4 AcrIF23 0.55 View Alignment uvig_390739_CDS_0032 M T M ---T R Y E ----I E -----R E -L D -S -----L Y K -D L N I A H N -----------A D E Q T (60)
MT + +Y +D
AcrIF23 M T N F Q T W L D -S A D I P -V Q Q N G Q -W I -D -L E T G I A Y D P -S Y N Y A A N T R R A S L S P R G I D A R A
uvig_390739_CDS_0032 V C K V F N T ------D T K N E A I -R A I ----T E E I D N Y E A I L ----D E ----M Y --------P (120)
V K F E + I + A
AcrIF23 V A K T F G G R A L T G T A R Q K E W A E -K I R A E K V Q Q M N Q D Q A E M A C D P S G L L T A A -K F W I E N R N D
uvig_390739_CDS_0032 T K ---H -V --------N Y E -----R T --------------A ---D -K -P Y -L C W (174)
+ A +
AcrIF23 S -A Q E -I -A G F V M Q Q K A L -L A Q H R --S A K A A G Q A D K V A K I A A E Y N A -L T A R W G F
uvig_390739_CDS_0032 5 AcrIIC4 0.54 View Alignment uvig_390739_CDS_0032 M T M T R Y E I E R E L D S L Y K D L N I A H N A D E Q -T V C K V F N T D T K N E A I R A I T E E I D N Y E -A I L -(60)
M T + + + + + + + +++ +
AcrIIC4 M K I T S S N F A T -I A T S E N -F A K L S V L P K -N -H --------R E P I K G L F K S A V E Q -F S S A R D
uvig_390739_CDS_0032 --D -E -----M ----Y P -T ---K H ----V -N Y E R T A D K P -Y -L C W (105)
E A+K +
AcrIIC4 F F K N E N Y S K E -L A E K F N K E A V N E A V E K L -Q K A I D L A E K Q G -I Q -F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;