3D Structure for uvig_38790_CDS_0014 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 89.53 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_38790_CDS_0014 1 AcrIE6 0.71 View Alignment uvig_38790_CDS_0014 M G Q L T F K S G S S Y S A S W E V -R N T -T L C A M E N Q V K E L T S L I N E L Y E A R E E I P T A C T T E K D E A (60)
M + + E+Q+K L+ EL + +
AcrIE6 M -N -------------N -D -T E V ----L E Q Q I K A F E L L A D E L K D R L P T L E I ----L ----
uvig_38790_CDS_0014 D Y Q I K L L K T S I D N L N K F I T L H R T A L N K S I E D A V K -W Y G -Q T A P E W F T K (108)
++ + D + K + +R L +E+
AcrIE6 S P M Y T A V M V T Y D L I G K Q L A S R R A E L I E I L E E Q Y P G H -A A D L S I K N L C P
uvig_38790_CDS_0014 2 AcrIE1 0.68 View Alignment uvig_38790_CDS_0014 M G Q L T F K S G S S Y S A S W E V R N T T L C A M E N Q V K E L T -S L I N E L Y E A R E E I P T A C T T E K D E A D (60)
M A W E + L ++ E + + +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A S I L -S L I V F ----Q A E T L S D Q A N E L A N Y I R
uvig_38790_CDS_0014 Y Q -I -K -L L K -T S I D N L N K F I T L H R -T -A L -N K -S -I E D A V K W Y G Q T A P E W F T K (114)
Q + N+ + ++ YG +
AcrIE1 R Q G -L -E E A -E G A C R N I D I M R A K W -V -E V -C -G E -V N Q H G I R V Y G D A I D -R D V D
uvig_38790_CDS_0014 3 AcrIF23 0.58 View Alignment uvig_38790_CDS_0014 M G -----------------Q L T F K -S G -S S -Y S A ------S W E ----------V R N ----(60)
M Q Y +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D -L E T G I -A Y D P S Y N Y A A N -T R R A S L S P R G I D -A R A V A
uvig_38790_CDS_0014 ---------------T T L C A M E N Q -V K E L T S L I N E L Y E A R E E I P T A C T T E K D E A D Y Q I K L (120)
+ V ++ E + TA + ++
AcrIF23 K T F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P S G L L T A A K F W I E N R N D S A Q E
uvig_38790_CDS_0014 L K T S I D N L N K F I T -L H R -T -A L N K S I E D -A V -K W -Y G Q T A P E W F ---T -K (170)
+ + + + H A D +
AcrIF23 I A G F V M Q Q K A L L -A Q H -R -S A K A A G Q A D K V -A -K I -A A E Y N A L T A R W -G F
uvig_38790_CDS_0014 4 AcrIIC4 0.58 View Alignment uvig_38790_CDS_0014 M G Q L T F K S G S S Y S A S W E V R N -T T L C A M E N Q V K E L T S L I N E L Y E A R E E I P T A C T T E K D E A D (60)
M +T + + K I + + ++ +D
AcrIIC4 M -K I T S S N -F A --T -I A -T -S E N F A K L S V L P K N H R E P I K G ---L F K S A V E Q F S S A R D F F -
uvig_38790_CDS_0014 -Y Q I -K -L L K T S I D N L N -K F I -T -L H R -T A L N K S I E D A V K W Y G Q T A P E W -F T -K (114)
+ + A+N +E + A
AcrIIC4 K -N E N -Y --------S K E -L A E -K F N -K E A V N E A V E K -L Q K A I D L A E K Q G I -Q F
uvig_38790_CDS_0014 5 AcrIC3 0.58 View Alignment uvig_38790_CDS_0014 M G Q L T F -K -S G S S Y S A S W E V R N T T L -C A M E N Q V K E L T S L I N E L Y E A R E E I P T A -C -T -T E (60)
M + +G + QVK + + E
AcrIC3 M S I -Q V T S T N G -R T V N L E I E L G S V -V A S -S G Q V K F M A D K T ------D R G L E S R F -L -V P E
uvig_38790_CDS_0014 K -D E A D ----Y Q I K L L K T S I D N L N K F I T L H R T A L N K S I E D A V K W Y G -Q T A P E W F T K (116)
+ L + + A N ++ ++
AcrIC3 -A -G N R R I E V A L T G R D L E A A N A L F S E L A A S V E A T N E M Y R E L D A E R -A -Q I N K A L E G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;