3D Structure for uvig_386689_CDS_0004 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 87.06 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_386689_CDS_0004 1 AcrIE1 0.72 View Alignment uvig_386689_CDS_0004 M T K Q E F T E L T G I N P T E E E -F D K I H D L Y M L T G A E M D K Q S F C A A Y K S C K D M T L V N -A L Y H N L (60)
M ++++ + + +L
AcrIE1 M -E K K L S D A Q -V ----A -L -V A A W R K --------Y P D L -------------R -E ----S L
uvig_386689_CDS_0004 L F S T S R L K -R E R D E M K -D -Y -R D -N T E K K -F K E L W -L S A T N A S E D I L R V A H E F P S D N I V A (120)
S L + +
AcrIE1 E E A A S I L -S L I V F Q A -E -T -L -S D -Q A N E L -A ---N ----Y I R R ----Q ----G ------
uvig_386689_CDS_0004 L A N K A A V T L I G Q S N V W K I K L R E G F S M G R E E R L R F C D E I T V M K G -Q I A E Y R K T G K I E G -L D (180)
+ E G
AcrIE1 -----L --------------E ----E A E G A C R N I D I M R A K W V -E V C G E V N Q H G I R V Y G D A
uvig_386689_CDS_0004 -R E R E N -E (188)
R +
AcrIE1 I D -R -D V D
uvig_386689_CDS_0004 2 AcrIIA11 0.60 View Alignment uvig_386689_CDS_0004 M T K Q E F T E L T G I N P T E E E F D K I H D L Y M L T G A E M D K Q S F C A A Y K -S -C -K D M T L V N A L Y H N (60)
M + D AL
AcrIIA11 M A D M T L R Q F C E R Y R K ------G D -F L A K D R E T Q I E A G W Y ---D W -F -C D D ----K A L A G R
uvig_386689_CDS_0004 L L F S T S R L K -R E R D E M K -D -Y R D N T E K K F K E L W L S A T N A S E D I L R --V -A -H E F P S D -N I (120)
L+ LK DN FK + + +D+ E D
AcrIIA11 L A K I W G I L K G ----I T S D -Y I L D N Y R V W F K N N C P M V G P L Y D D V R F E P -L -D -E E Q R D E L Y
uvig_386689_CDS_0004 ---V A --L ---A -------N ----K -----------A -A -V -T L I G Q S N V W K I K L R E G -F (180)
+ + G K E
AcrIIA11 F G V --A I D D K R R E K K Y V I F T A R N D Y E N E C G F N N V R E -V -R -Q F I N G W E D E L K -N --E E F Y
uvig_386689_CDS_0004 S -M G R E E R L -R F C D E I T V M K G Q I A E Y R K T -G K I E G L D R E R E N E (223)
E AE + +
AcrIIA11 -K A R E ----K -K R Q E M E E A N N K F A E I M Q R A D E ---I L W N L K E D
uvig_386689_CDS_0004 3 AcrIC3 0.60 View Alignment uvig_386689_CDS_0004 M T K Q E F T E L T G I N P T E E E F D K -I H D L Y M L T -G -A E M D K Q S F C A A Y K S C K D M T L V N A L Y H N (60)
M+ T +G + L L
AcrIC3 M S I -Q V T S T N G --------R -T V -N L ----E -I -------------------E ---L ---
uvig_386689_CDS_0004 L L F S T S R L K R E R D E M K D Y R D N T E K K F K E L W -L -S A T N A S E D -I L R V A H E F P S D N I V A L A N (120)
K D T++ L + + +
AcrIC3 -G S V V A S S ----G Q V K F M A D K T D R G ---L -E -S -R F -L ---V ---P ------E ----A --
uvig_386689_CDS_0004 K A A V T L I G Q S N V -W K I K L R -E -G F -S M G -R E E R L R F C D E I T V M K G Q I A E Y R K T -G K -I E G (180)
E E+ + E +
AcrIC3 ----------G -N R -R I E V A -L -T G -R D L -E A A N A L F S E L A A S V E A T N E M Y R E L D A E R A Q
uvig_386689_CDS_0004 L D R E R E N E (188)
+ +
AcrIC3 I N K A L -E G
uvig_386689_CDS_0004 4 AcrIF23 0.59 View Alignment uvig_386689_CDS_0004 M -T K Q E F T E L T G I N -------P -T -E E E -F D K -I H -D L Y M L -T G -A E -M D K Q S F C A -A Y K (60)
M + Q + + I E
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W -I -D L E -T G I -A -Y D P -S Y N Y A A N --T -R ---R A S L -S P
uvig_386689_CDS_0004 S -C -K D M -T L -V N A L Y H N L L F S T S R L K R E R D E M K D Y R D N T E K K F K E L W L S A T N A S E D I L R (120)
D + + +L + R ++ R + +
AcrIF23 R G -I -D A R -A V A K T F G G R A L ---T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P S G L --
uvig_386689_CDS_0004 V A H E F P S D N I V A -L A N K A A V T -L I G Q -S N V W K I K L R E G F S -M G R E E R L R F C D E I T V M K G Q (180)
+ A I + E + F + Q
AcrIF23 ----------L T A -A K F ----W -I E N R -----------N -D -S A Q E I A G F V M Q Q K A L L A Q
uvig_386689_CDS_0004 I A E Y R K T G ---K I ---E -G ----L -D R E R E -N E (213)
+ G K+
AcrIF23 H R S A K A A G Q A D K V A K I A A -E Y N A -L T A R --W G F
uvig_386689_CDS_0004 5 AcrIE6 0.58 View Alignment uvig_386689_CDS_0004 M T K Q E F T E L T G I N P T E E E F D K I H D L Y M L T G A E M D K Q S F C A A Y K S C K D M T L V N A L Y H N L L F (60)
M ++ E
AcrIE6 M -N N D T E V -L -----E ---Q -Q --------------------------------------
uvig_386689_CDS_0004 S T S R L K -R -E -R D -E -M -K -D -Y R D -N T E K K F K E L W L S -A T N -A S E D I -L R V A H E F P S D N (120)
+
AcrIE6 -I ----K -A -F E -L -L -A -D -E L K -D R ----L P T ----L --E I -----L -----S P M Y T A
uvig_386689_CDS_0004 I V A L A N K A A V T L I G Q S N V W K I K L R E G F S M G R E E R L R F -C -D -E I -T -V -M K G Q I A E Y R K T (180)
+ + + +L+ + Q
AcrIE6 V M V T Y D L I G K Q L A ------------------S ----R R -A -E -L I -E -I L E E Q Y P G H A A D
uvig_386689_CDS_0004 G K I E G L D R E R E N -E (194)
AcrIE6 L ----S -I K -N L C P
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;