3D Structure for uvig_385463_CDS_0162 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 95.80 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_385463_CDS_0162 1 AcrIB1 0.71 View Alignment uvig_385463_CDS_0162 M I Q K Q -T -W -----------------------------------------N -D -E V R I L I (60)
M +K+ + ++
AcrIB1 M E S K N L R K L L N E Y E E I D I N E M L K N F R S I K N S G T K N D I E I F L H E K A I K F E K S S I S S T Y V V F
uvig_385463_CDS_0162 T -D E E H I G S V Q I S I P -L Y ----V S -D I -F ------------------E --K -A D A L I Y A L (120)
+ D E +G +I L I + L+ L
AcrIB1 S E D N E I L G Y F T I A N R S L V I P K E N F G -I L -S K T Q Q K K L G N S A A I L K N G D L M -T S S F L L G Q L
uvig_385463_CDS_0162 F V D G -T H -R R C G V A ----K -H L L -Q -L A E Q -Q -A K S -N G V K T I G L E F N K D E S D R F V L Y W Y (180)
+ L VK I LE + + ++ +Y
AcrIB1 G K N Y S D D I E N L I T G R E L L -T F A -Y -D L F L -K -I K E -L I N V K Y I W L E C Q N ---E P K L I S F Y
uvig_385463_CDS_0162 L R S G Y K P F N K ---K --S N L L I K K L E G (206)
G K + I L
AcrIB1 Q N F G F K M L E S L T S E E G L K V M I M E L -K
uvig_385463_CDS_0162 2 AcrVA5 0.70 View Alignment uvig_385463_CDS_0162 M I Q K Q T W N D E V R I L I T D E E H I G S V Q I S I P L Y V S D I F E K A D A L I Y A L F V D G T H R R C G V A K H (60)
M + G + SI ++ I + V T +R G+
AcrVA5 M K -I E -L --------S -G ---G Y I C Y S I ---E -----E D E V T I D M V E V T -T -K R Q G I G S Q
uvig_385463_CDS_0162 L L Q L A E Q Q A K S N G V K T I G L E F N --K -D E S D R F V L Y W Y L R S G Y K P F N K -K S N L L I K K L E G (119)
L+ + A+ IGL S ++ +Y + L +
AcrVA5 L I D M V K D V A R E V -G L P I G L Y A Y P Q D D S I S Q E D L I E F Y F S N D F E Y D P D D V D G R L M R -W -S
uvig_385463_CDS_0162 3 AcrIF5 0.40 View Alignment uvig_385463_CDS_0162 M I Q K Q T W N D E V R I L I T D E E H I G S V Q I S I P L Y V -S D I F E K A D A L I Y A L F V D G T H R R C G V A K (60)
M V + E+ + G
AcrIF5 M S ----R -P T V V T V T E T P R ----N ---P G S -Y E -V N V E R D G K M V V G R A R A G -----S D P G
uvig_385463_CDS_0162 H L L Q L A E Q Q A K S N G V K T I G L E F N K D E S D R F V L Y W Y -L -R S G Y K P F N K K -S N L L I K K L E G (119)
++ A Q A G + + L
AcrIF5 A A A A K A M Q M A M E W G S P N Y V I L G --S ------N K V L A -F -I --------P -E Q L R V -K -M
uvig_385463_CDS_0162 4 AcrIIA28 0.40 View Alignment uvig_385463_CDS_0162 M I Q K Q T W N D E V R I L I T D E E -H I G S V Q --I S I P L Y V S D I F E K A D A L I Y A L F V D G T H R R C G V (60)
M EE +
AcrIIA28 M K -T I F T K K Q ------T E E L -----L N D --------------------I -------S I E K
uvig_385463_CDS_0162 A K H L L Q L A E Q Q A K S N G V K T I G L E F N -K --D -E S D R F V L Y W Y L R S G Y K P F N K K -----S N L (120)
K L + + +K + + ++ L
AcrIIA28 Q K E L F N S M H D F R S Q -H A K E A R I P -G W S D K Y N K L E K K M L S D F E E V T G I K Y D T L E S E L I W D N
uvig_385463_CDS_0162 L I K -K -L E -G (130)
L L
AcrIIA28 L S N K -F L Y N S
uvig_385463_CDS_0162 5 AcrVIA1_Lse 0.39 View Alignment uvig_385463_CDS_0162 M I Q K ---Q T W ----------N ----------D E -V R I L I T --D -E E -H I G S V Q I S I P -L Y (60)
MI + +
AcrVIA1_Lse M I Y Y I K D L K V K G K I F E N L M N K E A V E G L I T F L K K A E F E I Y S R E N Y S -K Y N K W F E M W K S P T S
uvig_385463_CDS_0162 V S D I F E K A D A L I Y A -L --F V D G T H R R C G V A K ----H L L ----Q -------------L A E Q (120)
+F K L G+ + + +
AcrVIA1_Lse S -L V F W K N Y S F R C H L L F V I E K -D G E C L G I P A S V F E S V -L Q I Y L A D P F A P D T K E L F V E V C N
uvig_385463_CDS_0162 Q A K S -N -G -V K T I G L E -F -N ----K ----D E S D -R ---------------F V -L Y W Y L R -(180)
T +E F ++ +
AcrVIA1_Lse L Y E -C -L -A D V T -V V E H F E -A E E S A W H K L T H N E T E V S K R V Y S K D D D E L L K Y -I P E F L D T I
uvig_385463_CDS_0162 ---S G Y --------K P F -------N K K ----------------S N -------L L I K K --- (240)
AcrVIA1_Lse A T N K K -S Q K Y N Q I Q G K I Q E I N K E I A T L Y E S S E D Y I F T E Y V S N L Y R E S A K L E Q H S K Q I L K E
uvig_385463_CDS_0162 -L E G (244)
AcrVIA1_Lse E -L N
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;