3D Structure for uvig_38339_CDS_0053 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 88.74 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_38339_CDS_0053 1 AcrIE6 0.72 View Alignment uvig_38339_CDS_0053 M Q E D D D I -I Y -L A L C N Q ----L Q S -Y Q -L -L L E -E -E K D -L ------S E E N R M M A E Y I I S (60)
M+ D + L L + + +
AcrIE6 M N N -D T E V -L E -Q Q I K A F E L L A D -E L -K -D R L -P -T L E -I L S P M Y T A V M V T Y D L I G K Q L A
uvig_38339_CDS_0053 R T L H L I E -I -Y A Q K I G S D T S I Q K -P K W D N L T R Q (93)
+ NL
AcrIE6 S R R A E L I E -I L E E Q Y P G H A A ---D L S I K N L C -P
uvig_38339_CDS_0053 2 AcrIIC4 0.57 View Alignment uvig_38339_CDS_0053 M Q E -D -D D I --------------------I Y L -A L C N ----Q -L Q S Y Q L L L E E E K D -L S E (60)
M + L +S E
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G -L F K S A V E -Q F S S A R D F F K N E N -Y ---
uvig_38339_CDS_0053 E N R M M A E Y I I S -R T -L -H -L -I E -I Y A Q K I G -S D T S -I Q K P K W D N L --T -R Q (112)
++ AE +QK+
AcrIIC4 -S K E L A E K F N K E -A V -N -E -A -V E -K L Q K A I D ----L -A E K ----Q G I -Q -F
uvig_38339_CDS_0053 3 AcrIF25 0.56 View Alignment uvig_38339_CDS_0053 M Q E ---D -D D I ------------------I ------------Y L A L C N Q ----L Q S -Y Q L (60)
M D + + A + L
AcrIF25 M D N D D K K P D A L I H L R V P A E V K G R W V K E S R L E G M K L T D W I T G R V E A K A L S I A E V L E -E A A -
uvig_38339_CDS_0053 -L L E E -E K D -L S E --E N R M M A E Y I I S R T L H L I E I Y A Q K I G -S ----D T S --------I Q K (120)
+ I + ++
AcrIF25 A M A -R S L E -D S P -I F Y R N K L C A D G I V T I Q Q Q A A R F S A A T D D A T R L D A A L W A R E G Y Q L L S -
uvig_38339_CDS_0053 ---------------------------------P --------K -W D N -L --T R Q (174)
AcrIF25 S G L P D S Y S G A V P N E G R T G W V T A S Q M A R L F G G E A -L W I E R C Q Q -E L G G A G K E D G R
uvig_38339_CDS_0053 4 AcrIE1 0.55 View Alignment uvig_38339_CDS_0053 M Q E ---D D D I ------------------I ----Y ----L -A -L -C N -Q L Q S Y Q L L L E E E -(60)
M D + L+ L
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E -A A S I L S L I V -F -Q -A -E T -L S D Q A N E L A N Y I
uvig_38339_CDS_0053 K D L S E E N R M M A E Y I I S R T L H L I E I Y A Q K I G S D T S I -Q K P K W D N L T -R Q (108)
+ E A I + + D
AcrIE1 R R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D -V -D
uvig_38339_CDS_0053 5 AcrIF3 0.54 View Alignment uvig_38339_CDS_0053 M Q -E D D D I I Y L A L C N Q L Q S Y Q L L L E E -E -K D L S E E N R M M A E Y I I S R T L H L I -E I Y A Q K I G (60)
M+ D I + E+ + L+E + A + R + +Q++
AcrIF3 M S S T I S D R I I S R S V I E A A R F I Q S W E D A D P D N L T E S Q V L A A S S F A A R L H E G L Q A T V L Q R L V
uvig_38339_CDS_0053 S D T S ------------I -Q K ----------------------------------P -----(120)
+++ +
AcrIF3 D E S N R D E Y R E F Q A W E E A L -L N A D G R V T S N P F A D W G W W Y R I A N V M L A T A S Q N V G V A W G S H V
uvig_38339_CDS_0053 --K ----W ----D N L T -R --Q (141)
+ + +
AcrIF3 H G R L M A I F Q D R F Q Q H Y E D E E C
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;