3D Structure for uvig_382976_CDS_0035 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.34 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_382976_CDS_0035 1 AcrIB1 0.82 View Alignment uvig_382976_CDS_0035 V V -I E I N K L ---S A D -V ---P -S S S F ---D C ---G N Q S I N N L I S R S Y -Y P T I L H Q A Y A F C (60)
+ KL + +F + I +
AcrIB1 M E S K N L R K L L N E Y E E I D I N E -M L K N F R S I K -N S G T K N D I E I F L H E K A I K F E K S S I S S T Y V
uvig_382976_CDS_0035 V S -N G D A I I A Y Y M L K F V -S I D -I ---G -K C P D E I S E F Y ----E -D --S -F E P H L C A V N I E (120)
V I+ Y + + + + +
AcrIB1 V F S E D N E I L G Y F T I A N R S L V I P K E N F -G I L S K T Q Q K K L G N S A -A I L K -N G D L M T S S F L L G
uvig_382976_CDS_0035 Y I A V D K K Y -Q -G -Y H F G T Y I L Q Q I I T D V Q N L C E Y W P V R F I T L D A --L T T K I D W Y K T L G F K (180)
+ G +L+ + + E V+ I L+ I +Y + GFK
AcrIB1 Q L G K N Y S D D I E -N L I T G R E L L T F A Y D L F L K I K E L I N V K Y I W L E C Q N E P K L I S F Y Q N F G F K
uvig_382976_CDS_0035 E F K P N N D S S S T V R M Y L D C A S I D L I H S Y V D T F C (212)
+ + +
AcrIB1 M L E S L T S E E G -L ----------K --V M I M E L K
uvig_382976_CDS_0035 2 AcrVA5 0.61 View Alignment uvig_382976_CDS_0035 V V I E I N K L S A D V P S S S F D C G -N Q S I N N L I S R S Y Y P T I L H Q A Y A F C V S N G D A I I A Y Y M L K F (60)
IE+
AcrVA5 M K I E L --S G --G Y I C ---Y S I ------------------E --------------------
uvig_382976_CDS_0035 V S I D I G K C P D E I S E F Y E D S F E P H L C A V N I E Y I A V D K K Y Q G Y H F G T Y I L Q Q I I T D V Q N L C E (120)
V+I+ + V G+ ++ + +
AcrVA5 ----------------------E -D E V T I D M V E V T -T -K R Q G I G S Q L I D M V K D V A R E ---
uvig_382976_CDS_0035 Y -W P V R F I T L D -A -------L T T K I D W Y K T L G F K E F K P N N D S S S T V R M Y L D C A S I D L I H S (180)
I L I++Y + F +
AcrVA5 -V --G L P I G L Y A Y P Q D D S I S Q E D L I E F Y F S N D F E Y D P D -D V --D ------G -------R -
uvig_382976_CDS_0035 -Y -V D T F C (188)
AcrVA5 L -M -R W -S
uvig_382976_CDS_0035 3 AcrIC11 0.40 View Alignment uvig_382976_CDS_0035 V V --I E I N K L S A D V P S S S F D C -----G -N Q S I N N L I S R S Y Y P T I L -H Q A Y A F C V S N -G D -(60)
++ S ++ + +
AcrIC11 M N K E T Q ---I T ---A -S A V --V G E D K -R L E F L S K H F G V R F A R R G -E A L V -F A W L L R L A K V
uvig_382976_CDS_0035 ---A I I A Y Y M -L K F V S I D I G K C P D E I S E F Y E D S F E -P -H L C A -V N I E Y I A V D K K Y Q G Y H F (120)
+ I +
AcrIC11 P I E W --T R L Q Y -Y T --L --------S ---N S G F Y -L -A P R E -L -R I S E C E L -----S A D A
uvig_382976_CDS_0035 G T -Y I L Q Q I I T D V Q N L C E Y W P V R -F I T L D -A L ------------T --------T K I D W Y K (180)
+ + +T + + + Y+
AcrIC11 -V G I -V A T M L T L R ----------Q -L A H -E S A A C V E A D S T Y P A A -K L A V T A S V K F A Q Q Y H
uvig_382976_CDS_0035 T L G F K E F K P N N D S S S T V R M Y L D C A S I D L I H S Y V D T F C (217)
L +
AcrIC11 H L A A -Y S V ---K ---H ------A ----E S I N I Y R A I D
uvig_382976_CDS_0035 4 AcrVA2 0.40 View Alignment uvig_382976_CDS_0035 V V ------I E I N K ---L ----S -A D V ---------P ------------------------(60)
NK
AcrVA2 M H H T I A R M N A F N K A F A N A K D C -Y K K M Q A W H L L N K P K H A F F P M Q N T P A L D N G L A A L Y E L R G
uvig_382976_CDS_0035 -------------------S ---S S F D C G N Q S -I N N -L I ----S -R --------S Y Y -P - (120)
I
AcrVA2 G K E D A H I L S I L S R L Y L Y G A W R N T L G I Y Q L D E E I I K -D -C K E L P -D D T P T S I F L N L P D W -C
uvig_382976_CDS_0035 T I L H -Q A Y -A F C V -S -N G ---D -A I -I A Y Y M L K F V S I D I G K C P D E I S E F Y E D S F E --P -H (180)
+ A + + + + +
AcrVA2 V Y V -D I S -S A Q I -A -T F D D G V A K H -I K G F W A I Y D I V E M -N G I ---N H D V L D F V V D T D -T -
uvig_382976_CDS_0035 L C A V N -I E -Y I A V D K K Y Q G Y H F G T Y I L Q Q I I T -D -V Q N -L C E -Y -W P V R F -I -T -L D A L T (240)
V ++ Q+++ + D +
AcrVA2 D D N V Y V P -Q P F I L S -S ---G -------Q S V A -E -V L -D Y -G A S -L -----F -D -D -D T S N
uvig_382976_CDS_0035 -T K I -D W Y K -T L G F K E -F K P N N D -----------------S ---------S S -T V R M Y L D (300)
I L + P S +
AcrVA2 T L -I K G L L -P Y L L W L C V A E P D I -T Y K G L P V S R E E L T R P K H S I N K K T G A F V T P S -E P F I Y Q
uvig_382976_CDS_0035 -C ---A S I ----D --------L --------------I ---------------H ---S --- (360)
S + +
AcrVA2 I G E R L G S E V R R Y -Q S I I D G E Q K R N R P H T K R P H I R R G -H W H G Y W Q G T G Q A K E F R V R W Q P A V
uvig_382976_CDS_0035 --Y V D T -F C (369)
AcrVA2 F V N S G R V S S
uvig_382976_CDS_0035 5 AcrIIC3 0.40 View Alignment uvig_382976_CDS_0035 V V I E I N K L S A D V P S S S F D C G N Q S I N N L I S R S Y Y P T I L H Q A Y A F C V S N G D A -I I A Y Y -M L K (60)
+ F
AcrIIC3 M F K R A I I F --T S ----F N G F E K V ----S R T -E --------K -R ---R L A K I -----I --N
uvig_382976_CDS_0035 F V S I D I G K -C -P D E I S E F -Y -E D S F E P H L C A V N -I E -Y I -A -V -D K K Y Q G Y H F G T Y I L Q Q (120)
+ S + + ++ Y T L
AcrIIC3 ---A ----R -V ----S -I I -D -E Y L R A K D T N A S L D G Q Y R A F L -F N -D --E S P A M T E F L A K
uvig_382976_CDS_0035 I I T D V Q N L C E Y W P V -R F I T L D A L -T T K -I D W Y K T L G F K E F K P N -N D S -S S T V R M Y L D C A S (180)
+ + + I + + + + + +
AcrIIC3 L K A F A E S C ---T -G I -S I D A W E I E E S E Y V R -L P V E R ----R D F L -A A A -N ----------
uvig_382976_CDS_0035 I D L I H S Y V D T F C (192)
+ +
AcrIIC3 ---G K -E I F -K I
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;