3D Structure for uvig_382021_CDS_0067 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 88.31 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_382021_CDS_0067 1 AcrIIA25 0.87 View Alignment uvig_382021_CDS_0067 M K N G Q -T I L G S R Y T D E I K N N S A T A S K M F N L S K K L E N D N L R E I H K A L Y G L L T A G Y D I S N M R (60)
M +LGSRYTD IKN TA+KM N+ KL D+LREIH ALYGLLTAGYDISNMR
AcrIIA25 M -K N -R -L L G S R Y T D A I K N D C G T A N K M S N I Y N K L N K D S L R E I H S A L Y G L L T A G Y D I S N M R
uvig_382021_CDS_0067 N V E E L E K Y V N V K K S H G K L L D V T N D D I E L Y H K L F V A R F G K (99)
N+EELEKYVN+KKS+G LL V++DDI LYHKLFV+RFGK
AcrIIA25 N I E E L E K Y V N L K K S R G Q L L N V S S D D I K L Y H K L F V I R F G K
uvig_382021_CDS_0067 2 AcrIIA28 0.83 View Alignment uvig_382021_CDS_0067 M K N G Q T I L G S R Y T D E I K N N S A T A S K M -F N L S K K L E N D N L R E I H K A L Y G L L T A G Y D I -S N M (60)
MK+ + + + +E+ +
AcrIIA28 M K T I ---F T K K ---Q T E E L -------L N D ----I S I E K Q K E L F N S M H D F R S Q H A K E A R -I
uvig_382021_CDS_0067 -R N V E E L E K Y V N V K K -S -H G K L L D V ----T N D D I E L -Y H K L F V A -R F G -K (110)
+ K + + L
AcrIIA28 P G W S D K Y N K L E K K M L S -D F E E V T G I K Y D T L E S -E L -I W D N L S -N K F L Y N S
uvig_382021_CDS_0067 3 AcrVIA1_Lwa 0.83 View Alignment uvig_382021_CDS_0067 M K N G Q T I L G -S R Y T D E I K N N S A T A S K M F N L S K K L E N D N L R E I H K A L Y G L L T A G -Y D I S N M (60)
M I + + + + +S+
AcrVIA1_Lwa M E K I K L I C L R I ------N ----N D E ------------L I T T D K D E W L K F I K R H R G K V S S I
uvig_382021_CDS_0067 R N V E E L E K Y V N V K K S H G K L L D V T N D D I E L Y H K L F V A R F G K (100)
E + K+L+ + D++ + R
AcrVIA1_Lwa ---E Q F N W K I -P G N K L Q K A L E Y S F D E L Y K F K Q K E N R R E T D
uvig_382021_CDS_0067 4 AcrIIA4 0.83 View Alignment uvig_382021_CDS_0067 M K N G Q T I L G S R Y T D E I K N -N -S -A T A S K -M F N L S K K --L -E N D N L R E I H K A -L Y G L L T A G (60)
M N + ++ R L + + + G
AcrIIA4 M -N I N D L I --R -------E -I -K N K D -Y T V -K L ---S G -T ----D S N S I T Q L I I R V N N D G
uvig_382021_CDS_0067 -Y D I S -N -M R N V E E L E K Y V N V K K S H G K L L D V -T N D D I E L -Y H K -L F V A -R F G K (113)
+ N +EK +++ K+ + + +
AcrIIA4 N E Y V I S -E S E N E S I V E K F I S A F K N G W N Q E Y E D E E E -F Y N D -M Q T I T L K S -E L N
uvig_382021_CDS_0067 5 AcrIF19 0.81 View Alignment uvig_382021_CDS_0067 M K N G Q T I L G S R Y T D E I K -N N S A T A S K M F -N -L S -K K L -E N D N L R E -I H K -A L -Y G L L T A -(60)
MK + Y + M + +
AcrIF19 M K P ---L H T M N Y ----D N ----N Q --M -S -L -V Y -E S Y D E --Y G -F E Y -S -V K L K --I S V
uvig_382021_CDS_0067 ----G Y D I S N M R N V E E L E K Y V N V K K S H G K L ---L D V T N -D D -I E L Y H K L ---F -V -A -R - (120)
G + + ++ I Y+ L
AcrIF19 R D Y R G ---I D V S A F N A F P E W E D T L R M R D -R V M S V E E I E N -A M I S R Y K S L F I A P P -D C T Y E
uvig_382021_CDS_0067 F G K (123)
F
AcrIF19 F D I
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;