3D Structure for uvig_381153_CDS_0016 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 85.70 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_381153_CDS_0016 1 AcrIE6 0.72 View Alignment uvig_381153_CDS_0016 M S S E E Q R L E S K ---I -L ----Y F E D M M F R C K G Y ------E Y Q K V E T I R K E I ----S -D -M (60)
M+++ LE+ D + I K +
AcrIE6 M N N D T E V L E Q Q I K A F E -L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R -A -E -
uvig_381153_CDS_0016 -R I -Q -L Q R I -R -F K N --M -R M --G -R (87)
L
AcrIE6 L I -E -I L E E -Q -Y P G H A A D L S I K N L C P
uvig_381153_CDS_0016 2 AcrIF23 0.59 View Alignment uvig_381153_CDS_0016 M S S E E Q R ---L E ----------S -------------------------------------(60)
M++ + ++
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
uvig_381153_CDS_0016 ---------------K ----I --------L -----------Y -F -E -D -M M -F -R C K G Y E (120)
K +
AcrIF23 G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q -A E M A C D P S G L L T A -A -K -F W -I -E N -R N D S
uvig_381153_CDS_0016 Y Q K V E T I R K E I S D M R I -------Q -----L -Q -R -I -R -F -K N M R M ---G --R (173)
Q + +
AcrIF23 A Q E I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K -V -A -K -I -A -A E Y N A L T A R -W G F
uvig_381153_CDS_0016 3 AcrIE1 0.53 View Alignment uvig_381153_CDS_0016 M S ----S -E E Q R -L E ----------S ----K --------I -------L -Y -F E -D -M M -F (60)
M L
AcrIE1 M E K K L S -D A Q V -A L V A A W R K Y P D L R E S L E E -A A S I L S L I -V F Q A E T L S D -Q -A N -E L -A N
uvig_381153_CDS_0016 R C -K G Y -------E Y Q K V E T I ----R -K -E -I -S -D -M -R -I -Q -L Q R I R F K N M R -M -G -(120)
+ ++ R+
AcrIE1 Y -I R R Q G L E E A E G A C R N I D I M R A K W -V -E -V -C -G -E -V -N -Q -H G I R V Y G D A I -D -R D V
uvig_381153_CDS_0016 R (121)
AcrIE1 D
uvig_381153_CDS_0016 4 AcrIIC4 0.52 View Alignment uvig_381153_CDS_0016 M -S -S -E E Q R ---L -E -------S --------K -------I L -Y F -E D M M F R C --K G Y E Y (60)
M S ++ Y
AcrIIC4 M K I T S S N F A T I A T -S -E N F A K L S -V L P K N H R E P I K G L F K S A V E Q -F S S A R D F F K N E N Y S K
uvig_381153_CDS_0016 Q K V E -T I R K E I S D M R I Q L Q R I R F K N M R M --G R (92)
+E + +++ LQ++ +
AcrIIC4 E L A E K F N K E A V N E A V E K L Q K A I D L A E K Q G I Q F
uvig_381153_CDS_0016 5 AcrIC3 0.50 View Alignment uvig_381153_CDS_0016 M S -S E E Q R L E ----------S -------------K I ----L --------------Y F ---(60)
MS + + S K
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S S G Q V K F M A D K T D R G L E S R F L V P E A G N R R I E V -A L T
uvig_381153_CDS_0016 E -D M M F R C -K G -Y -E Y -Q K V -E -T I R K E I S D M R I Q L Q R I R F K N M R M -G R (109)
+ ++M L R +
AcrIC3 -G R D L E A -A N -A -L F -S E -L A -A -S V E A T N E M Y R E L D A E R A Q I N K A L E G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;