3D Structure for uvig_38114_CDS_0053 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 84.51 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_38114_CDS_0053 1 AcrIE6 0.72 View Alignment uvig_38114_CDS_0053 M T M T R Y E I E R E L D S L Y K D L N I ---A H N A D E Q T V C R V F ----N -T D ----T K N E A I R A I T D (60)
M+ +E + + + + + T + + +
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D -E L K D R L P T ---L -E I -L S P M -Y -T A V M V T Y D L I G K Q L A S
uvig_38114_CDS_0053 E I D S Y E T L L D E I Y P D K H V N Y E R T A S E P Y L C W (91)
+L+E YP + + S LC
AcrIE6 R R A E L I E I L E E Q Y P G H A A -D --L -S I K N L C P
uvig_38114_CDS_0053 2 AcrIF2-IC2 0.57 View Alignment uvig_38114_CDS_0053 M -T M T R Y E I E R E ---L D S -------L ---Y K D L -----N I -A H N -A D E Q -T V C R -V F N T D (60)
M T T I + + D++ +
AcrIF2-IC2 M A T K T A Q M I A Q Q H K D T V A A C E A A E A I A I A K D Q V W D G E G Y -T K Y -T F D D N S V L -I Q S --G T
uvig_38114_CDS_0053 T K N E A I R A I T D E I D S Y E T L L D E I Y P D -K H V N Y E R T A S E P Y -L -C W (105)
T D I Y LD+ ER +
AcrIF2-IC2 T Q Y A M D A D D A D S I K G Y A D W L D D E A R S A E A S E I E R L L E S -V E -E -E
uvig_38114_CDS_0053 3 AcrIF23 0.56 View Alignment uvig_38114_CDS_0053 M T M T R Y E I E ------R E L D S --------L Y K -D L N I A H N -----------A D E Q T V C R V F (60)
MT ++ + +Y +D V + F
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P -S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
uvig_38114_CDS_0053 N T ------D ----T K N E A I R A I T D E I D S Y E T L L D E I -Y -----P D K H ------V ------(120)
+ + +
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C -D -P S G L L T A A K F W I E N R N D S A Q E I
uvig_38114_CDS_0053 --------N Y E ----------------R T -----A -S E P Y --L -C W (166)
+
AcrIF23 A G F V M Q Q K A L -L A Q H R S A K A A G Q A D K V A -K I A A E Y N A -L T A R -W G F
uvig_38114_CDS_0053 4 AcrIE1 0.56 View Alignment uvig_38114_CDS_0053 M T -M ---T R Y E I E -------------R -E -L -D -S ----L Y K D L N I A H N -A D E Q T V C R V F (60)
M + + + +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E -A -A -S -I L S L I V F Q A E T L S -D Q A N E L -A N Y I
uvig_38114_CDS_0053 ---N T D T K N E A I R -A I -T -D E I D S Y E T L L D E -I -Y -P D K H V -N Y -E R T A S E P Y L C W (116)
+ A + +
AcrIE1 R R Q G L E E A E G A C -R N -I -D I M R A K W V E V C G -E -V -N Q H G I R V Y -G -D A I D -R D -V D
uvig_38114_CDS_0053 5 AcrIIC4 0.54 View Alignment uvig_38114_CDS_0053 M T M T R Y E I E R E L D S L Y K D L N I A H N A D E Q -T V C R V F N T D T K N E A I R A I T D E I D S Y E -T L L D (60)
M T + + + + + + + +++ ++ D
AcrIIC4 M K I T S S N F A T -I A T S E N -F A K L S V L P K -N -H --------R E P I K G L F K S A V E Q -F S S A R D
uvig_38114_CDS_0053 E I ---Y -------P D -----K H ----V ---N Y E R T A S E P Y -L -C W (105)
A +
AcrIIC4 F F K N E -N Y S K E L A E -K F N K E A V N E A V E K L Q K A I D L A E K Q G I -Q -F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;