3D Structure for uvig_380767_CDS_0166 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 90.30 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_380767_CDS_0166 1 AcrVA5 0.72 View Alignment uvig_380767_CDS_0166 M I Q K Q T W K D E I R I L I T D E E N H G S V Q I S I P L Y V S D I F G K A D A L I Y A L W V D V V Y R R N G V A Q R (60)
M G + SI ++ I + V +R+G+ +
AcrVA5 M K -I E -L ---------S -G --G Y I C Y S I --E ------E D E V T I D M V E V T -T -K R Q G I G S Q
uvig_380767_CDS_0166 L L Q L A E Q Q A K L N G V K K I G L E F D -K -D -E S D R F V L D W Y L R S G Y K L F D K K S N -F T -T V Q (117)
L+ + A+ IGL D S ++++Y + +
AcrVA5 L I D M V K D V A R E V -G L P I G L Y A Y P Q D D S I S Q E D L I E F Y F S N D F E Y D P D D V D G R L M R W S
uvig_380767_CDS_0166 2 AcrIB1 0.71 View Alignment uvig_380767_CDS_0166 M I Q K Q T -W ------------------------------------------K -D -E -I R I L (60)
M +K + K ++
AcrIB1 M E S K -N L R K L L N E Y E E I D I N E M L K N F R S I K N S G T K N D I E I F L H E K A I K F E K S S I S S T Y V V
uvig_380767_CDS_0166 I T -D E E N H G S V Q I S I P L -Y ----V S D -I F ------------------G -K A D A L I Y A L W V (120)
+ D E G +I + L+ L
AcrIB1 F S E D N E I L G Y F T I A N R S L V I P K E N F G I L S K T Q Q K K L G N S A A I L K N G D L M T S S F L L G Q L G K
uvig_380767_CDS_0166 D V -V Y -R R N G V A Q ----R L L -Q -L A E Q -Q -A K -L N G V K K I G L E F D K D E S D R F V L D W Y L R S (180)
+ L L VK I LE + ++ +Y
AcrIB1 N Y S D D I E N L I T G R E L L T F A -Y -D L F L -K -I K -E L I N V K Y I W L E C Q N ---E P K L I S F Y Q N F
uvig_380767_CDS_0166 G Y K L F D K -K --S N -F -T -T -V Q (202)
G K + +
AcrIB1 G F K M L E S L T S E E G L K V M I M E L K
uvig_380767_CDS_0166 3 AcrIF5 0.43 View Alignment uvig_380767_CDS_0166 M I Q K Q T W K D E I R I L I -T D E E N H G S V Q I S I P L -Y V -S D I F G K A D A L I Y A L W V D V V Y R R N G V (60)
M + + + + + +
AcrIF5 M S ------R P T V V T V T E T P R ---N ----P G -S -Y E -V N V E R D G K M V V G R A -R A G ----S D
uvig_380767_CDS_0166 A Q R L L Q L A E Q Q A K L N G V K K I G L E F D K D E S D R F V L D W Y L R S G Y -K L F D K K -S N -F T T -V Q (119)
++ A Q A G + S +
AcrIF5 P G A A A A K A M Q M A M E W G S P N Y V I L G ----S -------N -----K -V L A F I P -E Q L R -V K M
uvig_380767_CDS_0166 4 AcrIIC3 0.40 View Alignment uvig_380767_CDS_0166 M I Q K Q T W K D E I -R I L I T D ------E -----E N H -G S V Q I S I P L Y -V S D I F ----G -K A D -(60)
M I + + +
AcrIIC3 M F -------K R A I I F T S F N G F E K V S R T E K R R -L A K I -I N A R V S -I I D E Y -L R A K -D T N -A
uvig_380767_CDS_0166 A L I Y ---A L W V D V V Y R R N G V A Q R L L Q L A E Q Q A K L N G V K K I G L E F D K D E S D R F V L D W Y L R -(120)
L A + + + L + A I + + + +
AcrIIC3 S L D G Q Y R A F L F N D ---E S P A M T E F L A K L K A F A E S C T G I S I D A W E I E E ---S E Y V R L P V -E
uvig_380767_CDS_0166 S G Y -K L F D K K S N F T T V -Q (138)
+
AcrIIC3 -R R D -F L A A A N G K E I F K I
uvig_380767_CDS_0166 5 AcrVIA1_Lse 0.39 View Alignment uvig_380767_CDS_0166 M I ---Q K ----Q -T W -----------K -------D -E -I ---------------------(60)
MI
AcrVIA1_Lse M I Y Y I K D L K V K G K --I F E N L M N K E A V E G L I T F L K K A -E -F E I Y S R E N Y S K Y N K W F E M W K S
uvig_380767_CDS_0166 --R --I L I T -D -------------E E N H G S V Q I ---S I P -L Y -V -S D I F -------G -K - (120)
+ E G S+ +
AcrVIA1_Lse P T S S L V F W K N Y S F R C H L L F V I E K D G E C L G I P A S V F E S V -L Q I Y L A D P F -A P D T K E L F V E V
uvig_380767_CDS_0166 --A -----D -A L I Y -A L W V D V V Y R ---R -N G V A Q ----------------R L -L Q -L A E Q (180)
+ + + + +
AcrVIA1_Lse C N -L Y E C L A D V T V V E H F E A -E E S A W H K -L T H N E T E V S K R V Y S K D D D E L L K Y -I -P E F -L D
uvig_380767_CDS_0166 Q A K L N G V K K I G L E F D ---K D E S D R F V L ------------D W Y L R -S G Y K L F D K ----K -S (240)
++ N E + ++ +
AcrVIA1_Lse T I A T N K K S Q K Y N -Q I Q G K I Q E I N K E I A T L Y E S S E D Y I F T E Y V S -N L Y R E S A K -L E Q H -S K
uvig_380767_CDS_0166 N F -T -T -V Q (249)
+ ++
AcrVIA1_Lse Q I L K E -E L N
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;