3D Structure for uvig_380550_CDS_0022 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 97.12 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_380550_CDS_0022 1 AcrIE2 0.71 View Alignment uvig_380550_CDS_0022 M K N Y L F Y -D E E -T ---G E H F F V Q D -E S L W K A N E T A H K Y F K R ----P F S I D E M ---D D ---(60)
M +YL + GE+F V + A A E
AcrIE2 M N T Y L I -D P R K N N D N S G E R F T V D A V D I T A A A K S A A Q Q I L G E E F E G -L V Y R E T G E S N -G S G
uvig_380550_CDS_0022 -------A ---E A --E -M -Y --G Y -D -T Y (89)
+
AcrIE2 M F Q A Y H H L H G T N -R T -E T T V G Y P F H V M E L
uvig_380550_CDS_0022 2 AcrIC9 0.68 View Alignment uvig_380550_CDS_0022 M -K ---N -Y L F Y D E E T G E H F F V Q -D E ---S L W K A N E T A H K Y F -K -R P F S I D E M D D A E A E -(60)
M + Y + + + + + + ++ +AE
AcrIC9 M E T K M T S F Y K I T A -Y N S Q A L Y F -W -G T D A D V D R Y V D W L N R D -R E I N V Y A A E A I P E A E W A Q
uvig_380550_CDS_0022 ------M -Y -G Y --------D --T Y (85)
AcrIC9 Y E G R D D -V L S -G E E C G W D D F M S A E A
uvig_380550_CDS_0022 3 AcrIIA27 0.65 View Alignment uvig_380550_CDS_0022 M K N Y L F -Y D E ---E -------T G E -H F F V Q D E S L W K A N E T A H K Y F ----K R P ---F S I D E (60)
MK+ E V + A A+ K +
AcrIIA27 M K T F N I I V S E S A N L K E H S S E L V D N I I Y K V E A K N R R E A F K K A R E E Y S F S S K W K F N M R D L T A
uvig_380550_CDS_0022 M D D A ---E -A E M Y G -Y D T Y (79)
D Y +
AcrIIA27 I D N T H R R A W G R R Y L R V E E A
uvig_380550_CDS_0022 4 AcrIIA20 0.58 View Alignment uvig_380550_CDS_0022 M K N Y L F Y D E E T G -E H F F --V Q D E S L W K A N E T A H K Y F -K R P F S I D E ---------M ----D (60)
MKNY Q E++ A + + +
AcrIIA20 M K N Y E V -T ---N E -V K N L N T Q V E T I G Q A V D L Y K E --Y G S N T I V W S I D K N E D L I D E V T E L -
uvig_380550_CDS_0022 -D -A -E A E M Y G Y D T Y (75)
G
AcrIIA20 V -A -E Y -A E K G T V I K
uvig_380550_CDS_0022 5 AcrIE8 0.57 View Alignment uvig_380550_CDS_0022 M K N Y L F Y D E E T G -E -H F F V Q D E S L W K A N E T A H K Y F ----K R P F S I D E --M -D D A E A E M Y -(60)
M + E +F + E + + D+
AcrIE8 M T T I T I N -T Y -D P E A R F N M S G E E A K E F F A F V E E Q A K V S G F D V Y Y D S C T Y -V D E E S E R -F V
uvig_380550_CDS_0022 G --Y D T Y (67)
+Y
AcrIE8 E K C F Q N Y
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;