3D Structure for uvig_380420_CDS_0011 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 86.88 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_380420_CDS_0011 1 AcrIE1 0.86 View Alignment uvig_380420_CDS_0011 M T R D E A I D K L Y H T Q I R L A V S E -K Y K K C G E E I H Q L -F M K A E R L S E -L L N S ---R -E G -K N -(60)
M + Q+ L++ KY + + A + ++ + +
AcrIE1 M -E K K L ----S D A Q V A L V A A W R K Y ---P D L R E S -L E E A A -S I L S L I V F Q A E T L S D Q A N -E
uvig_380420_CDS_0011 L P Y C V Y K D K M L E L E R Y E E -Q L -K E -Y K I R R D V W D Q A R D L C F D T A -D S -V -V -R -L V F G L E (120)
L + + LE E + I R W + ++
AcrIE1 L A N Y I R R Q ---G L E E -A E G A -C R -N I D I M R A K W V E V C G E V N Q H G I -R V -Y -G -D A I D R D V
uvig_380420_CDS_0011 D (121)
D
AcrIE1 D
uvig_380420_CDS_0011 2 AcrIE6 0.81 View Alignment uvig_380420_CDS_0011 M T R D E -A I D K L Y H T Q I R L A V S E K Y K K C G E E I H Q L F M K A E R L S E L L N S R E G K N L P Y C V -Y K (60)
M + L I+ A+ L + L + E + Y +
AcrIE6 M -N N -D -T E V L E ---Q Q -------------I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V
uvig_380420_CDS_0011 D K M L E L E R Y E E Q L K E -Y K I R R D V W D Q -A -R D -L C F D T A D S V V R -L V F -G L E -D (113)
L + A +
AcrIE6 T Y D L I G K Q L A S R R A -E L I E -------I -L -E E Q Y P G H A ---A D L -S I K N -L C P
uvig_380420_CDS_0011 3 AcrIIA28 0.81 View Alignment uvig_380420_CDS_0011 M T R D E A I D K L Y H T Q I R L A V S E K Y K K C G E E I H Q L F M K A E R L S E L L N S R E G K N --L P Y C V Y K (60)
M T L E + LF E Y
AcrIIA28 M K T I F T K K ---Q T E E L L N D -I ----S I E K Q K E L F N S M H D F R S Q H A K -E A -R I P G W S D K Y N
uvig_380420_CDS_0011 D K M L -E -L E R Y E E Q L K E Y K I R R D V W D Q A -R D L C F D T A D -S -V V R L V F G L E D (111)
L EE D++ +L +D
AcrIIA28 K L E K K -M L S D F E E V T ---G -I --K Y D T L E S E L I W D ---N -L -S N K F L Y N -S
uvig_380420_CDS_0011 4 AcrIIA19 0.80 View Alignment uvig_380420_CDS_0011 M T -R D E A I D K L Y H T -Q I R L A V S -E K Y K K C -G E E I H Q L F M K A E R L S E L L N S R E G K -N ----(60)
M E+ + Y++ ++ E I K L L+ R
AcrIIA19 M K L I V E V E E T N Y K N L V N Y T K L T N E S H N I L V N R L I S E Y I T K P Y E L R L D L S E R -Y S N -R D L I
uvig_380420_CDS_0011 -L P Y C V -Y K -D -K -M L E L E R Y ----E E Q -L K ----E Y K I R R D V -W D Q A R ---D -L C F D T A (120)
L ++ + Q+ DT+
AcrIIA19 E F K F -M L I -E -Y -C K E A L Q D -I K E L A N -S -D E A Y E -T D E A F E A V F R Q L F E E V I S -N P D T V
uvig_380420_CDS_0011 D S V V R L V F -G -L --E D (136)
+ + L
AcrIIA19 L K A F H S Y T S -F L E E N K
uvig_380420_CDS_0011 5 AcrIF3 0.79 View Alignment uvig_380420_CDS_0011 M T ---R D E A I D K -L -----Y H T ----Q I R ---L -A V S -E K Y K K C G E E I H Q L F M K -A E R L S (60)
M+ D +I + ++ + L +
AcrIF3 M S S T I S D R I I S -R -S V I E A A R F I Q S W E D -A D P -D N L T E S Q V L A A S S F A A R L H E G L Q A T V L
uvig_380420_CDS_0011 E L L N S R E G K N L P Y C V Y K D K M L E -L E R Y -E -E Q L K E Y K I ---R R D V W D Q -A -R -D -----L (120)
L Y L + +
AcrIF3 Q R L V D E S -N R D E Y R E F Q A W E E A L L N A -D -G R V T S N P F A D W G W W Y R I A N V -M -L -A T A S Q N
uvig_380420_CDS_0011 ----C F D T -A D -S -V V R L V F G ----L ----E -D (153)
+ + E
AcrIF3 V G V A W G S H V H -G -R L M A I F Q D R F Q Q -H Y E D E E C
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;