3D Structure for uvig_380318_CDS_0061 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.44 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_380318_CDS_0061 1 AcrIE6 0.74 View Alignment uvig_380318_CDS_0061 M T G Y E A -N I L -R N -I ---R E D R K R Y S R L L Q I E S I K Q Q ----P -N T K V V N F L K K L I E V Q D E (60)
M+ + L + I L I + + K +
AcrIE6 M N N -D T E V -L E -Q Q I K A F E L L A D E L K D R L P T L E I L -S P M Y T -A V M V T Y D L I G K Q L A S R R A
uvig_380318_CDS_0061 E -I K S Y ---E ----E K -E C ---D K (84)
E I
AcrIE6 E L I E I L E E Q Y P G H A A D L S I K N L C P
uvig_380318_CDS_0061 2 AcrIIC4 0.64 View Alignment uvig_380318_CDS_0061 M T G --Y E A N -I ------------L -----R -N ----I R -E -D ----R K R Y S R L L Q I E S -I (60)
M I + E
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L -P K N H R -E -P I K G L F K -S -A V E Q F S S A R D F F K N E -N -
uvig_380318_CDS_0061 K Q -Q P N T -K V V -N F L K K L I E V Q D E E I K S Y E E K E -C D K (97)
+ + ++E I EK
AcrIIC4 Y S K E L A E K -F N K E A V N E A V E K L Q K A I D -L A E K Q G I Q F
uvig_380318_CDS_0061 3 AcrIE1 0.56 View Alignment uvig_380318_CDS_0061 M T G ---Y E A ----N ----I ----L --------R -N ----I ---R E -D -R K -R Y -S -R -L L (60)
M I E L
AcrIE1 M E K K L S D A Q V A L V -A A W R K Y P D L -R E S L E E A A -S -I L S L I V F Q A E T -L S -D Q -A -N -E L -
uvig_380318_CDS_0061 -Q I E S I K Q ----Q P N T K V V N F L K K L I E V Q D E E I K S Y ----E E K -E C D --K (110)
+ + + + E+ +
AcrIE1 A N Y I R R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D V D
uvig_380318_CDS_0061 4 AcrIF23 0.55 View Alignment uvig_380318_CDS_0061 M T G --Y ---E -A -------N ------I ----------L -------------------R --(60)
MT + +
AcrIF23 M T N F Q T W L D S A -D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
uvig_380318_CDS_0061 --------------------N ----I ---R E D -R K -R Y S R -L L Q ----I E S I K Q Q P N T K V (120)
+ L + +
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A -C D -P S G L -L T A A K F W I E N R N D S A Q E
uvig_380318_CDS_0061 V N F L K K L I E -------V Q --------D -E -E -I -K -S -Y -E -E -K E C -D --K (172)
+
AcrIF23 I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K V A -K -I -A -A -E -Y -N -A -L T A R W G F
uvig_380318_CDS_0061 5 AcrIIA32 0.54 View Alignment uvig_380318_CDS_0061 M T ------G -Y ----E -A -N --------------I ----------------L --------(60)
M +
AcrIIA32 M K N E D G K L V V -S K A H -F -G -N M I R N C Q S V E D F K K -S F E R L T Y Y S S E N R E S T V R Q R L K I A E
uvig_380318_CDS_0061 -------R ---------N I --------------R E -D -R K -R Y S R L L Q I E S I K Q Q P -N T K (120)
+ + + + +
AcrIIA32 K E Y N F K A G V K E D L E I K N T T D K E I L D Y V R N E L S K I D S -K K -Q A D K N W S E K N R E H R N -Y L -S
uvig_380318_CDS_0061 V V N F L K ------K -L I E -V Q D E E I K S Y E E K E C D K (154)
+ ++ E K EE K
AcrIIA32 K R S S A R S F I N N N -A T H -E D L L E L K K I I E E -K L -K
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;