3D Structure for uvig_378277_CDS_0005 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 83.82 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_378277_CDS_0005 1 AcrIE1 0.72 View Alignment uvig_378277_CDS_0005 M E -R K T F L G F D V T P R K K L W T E V G H L K G R I Y E L E N L A A R Y V M E R N A A D A E L A S R E Q R I -L A (60)
ME + + + V +W L+ + E+ +++ V + + + I
AcrIE1 M E K K L S D A -Q -V -A L V A A W R K Y P D L R E S L E E A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R R Q
uvig_378277_CDS_0005 L T S R A D K F E K Q V C K L E G K L R K F D R A R G -E -S G -K Y I K G H E T R S A K (105)
A+ +++ K G + R +
AcrIE1 G L E E A E G A C R N I D I M R A K W V E V C G E V N Q -H -G I R V Y G D A I D R D V D
uvig_378277_CDS_0005 2 AcrIC3 0.59 View Alignment uvig_378277_CDS_0005 M E R -K -T F L G ---F -D V ------T -P R K K L -W -T E V G H L K -G -R I Y E L E N -L A A ---R Y V (60)
M + G + + + +
AcrIC3 M S I Q V T S T N G R T V N L E -I E L G S V V A ----S S -G Q V -K F M A D -K T ----D R G -L E S R F ---
uvig_378277_CDS_0005 ---M E R N A -A D -A E L A S R E Q R I -L -A L -T -S -R -A -D -K -F -E -K Q V C -K L E G K L R K F D R (120)
N ++ A L +
AcrIC3 L V P E A G N R R I E V A L ---T ----G -R D -L -E -A -A -N -A -L -F -S ----E -L A A S V E A T N E
uvig_378277_CDS_0005 A R G E S G K Y I K G H E T R S A K (138)
E
AcrIC3 M Y R E L D A E R A Q I N K A L E G
uvig_378277_CDS_0005 3 AcrIE6 0.57 View Alignment uvig_378277_CDS_0005 M E R K T F L G F D V -T P R K K L -W T E V G H L -K -G -R -I Y -E L E -N L A A R Y V M E R N A A D A E L A S R (60)
M L + + L R +
AcrIE6 M N -N -D ---T -E V ----L E -Q Q ----I -K -A -F E -L L A -D E L K D R L P T L E I -L ---S P M -
uvig_378277_CDS_0005 E -Q R I L A L T S R A D K F E K Q V C K L E G K L R -K -F D -R A R G E S G K --Y I K G H E T R S A K (114)
+ L L
AcrIE6 Y T A V M V T Y D L I G K Q L A S R R A E L I E I L E E -Q -Y P G H ---A -A D L ----S I K N L C P
uvig_378277_CDS_0005 4 AcrIF23 0.54 View Alignment uvig_378277_CDS_0005 M E ---R K --------T F L G F -D --V ----------------------------T -P R -K -(60)
M + G
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L -E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V -A -K
uvig_378277_CDS_0005 --------K L W -T -E V -G H L K G R I Y E L E N L A A R Y V M -E -R -N -A A -D A -E L A -S R E Q R I L (120)
+ E + + I
AcrIF23 T F G G R A L T G T -A -R Q -K E W A E K I R A E K V Q Q M N Q D Q A E -M -A -C D -P -S G L -L T A A K F W I E
uvig_378277_CDS_0005 A L T S R A D K F E -K Q V C K L -E -G -K L -R K F D -R A R ----G E -S -G -K -Y I K G H E T R S ---A -(180)
+ A V A+ + + +
AcrIF23 N R N D S A Q E I -A G F V M Q -Q -K -A L -L A -Q H R S A K A A G Q A D K -V -A -K I A A E Y N A L T A R W -G
uvig_378277_CDS_0005 K (181)
AcrIF23 F
uvig_378277_CDS_0005 5 AcrIIA11 0.52 View Alignment uvig_378277_CDS_0005 M E R K T F L --G F -D V --------------T -------P ----R -K -K -L W -T E V G H L K G --(60)
M T L G LKG
AcrIIA11 M A D M T L R Q F C E R Y R K G D F L A K D R E T Q I E A G W Y D W F C D D K A L -A -G -R L -A K I W G I L K G I T
uvig_378277_CDS_0005 ------R I Y -E L -E -N --------L A A ---R Y V M -E R N A A D A ------------------ (120)
L R
AcrIIA11 S D Y I L D N Y R V W -F -K -N N C P M V G P L -Y D D V R F E -P L D E E Q R D E L Y F G V A I D D K R R E K K Y V
uvig_378277_CDS_0005 ------------E L ----A S R E Q R I L A L T S R A D K --F E K Q V C K L E G K L R K F D R A R G E S G K (180)
Q I + F K K E
AcrIIA11 I F T A R N D Y E N E C G -F N N V R E V R Q F I N G W E D E L K N E E F Y K A R E K K R Q E M E E A N N K F A E I M Q
uvig_378277_CDS_0005 Y I K G H E T R S A -K (192)
+
AcrIIA11 R A D E I L W N L K E D
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;