3D Structure for uvig_376839_CDS_0028 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 86.89 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_376839_CDS_0028 1 AcrIE3 0.60 View Alignment uvig_376839_CDS_0028 M K K -Q N V K I K F S -G N L Y D R D L I V S ----Y M R D D L R E K -L H S E W T E -E K G G E Q ----E F F -(60)
MK + + Y+ + + L E
AcrIE3 M K I T N ---D ---T -T T Y E V A E L M G S E A D E L D G R I M M G L L S R E C V V D T D D L S E D Q W L A L -I
uvig_376839_CDS_0028 E A Y C E -L L R N E T G E E F E I (78)
+ + R + E E+
AcrIE3 D E S Q -K V R R E -Q F E S D E A
uvig_376839_CDS_0028 2 AcrIC5 0.57 View Alignment uvig_376839_CDS_0028 M K K Q N V K I K -F S G N L Y D R D L I V S Y M R D D L R E K L H S E W T E E K G G E Q E F F E A Y C E L L R N E -T (60)
M V +G+ D D++V+ M +LRE LHS E +QEF +AY +
AcrIC5 M S --K V -T -L -N G Q Q I D F D A A V N L M D A E L R E E L H S A Q -E W T -N D Q E F L D A Y V Q A H A A K F D
uvig_376839_CDS_0028 G E E F E -I (67)
GEEF +
AcrIC5 G E E F Q V A
uvig_376839_CDS_0028 3 AcrIE8 0.56 View Alignment uvig_376839_CDS_0028 M K K Q N V K I K F S G N L Y D R D L I V -S -Y M -R D -D L R E K L H S E W T E ---E K G G E Q E F F E A ---Y (60)
M + + I ++ M E G +
AcrIE8 M -T T -I T I N T -Y -D --P E A R -F -N -M S G -E -E A K E F F A F V E E Q A K V S -G F D V Y Y D S C T Y V
uvig_376839_CDS_0028 C E -L L R N E T G E E F E -I (76)
F
AcrIE8 D -E E S E R F V E K C F Q N Y
uvig_376839_CDS_0028 4 AcrIIA33_Seq 0.55 View Alignment uvig_376839_CDS_0028 M K K Q N V K I K F -S -G N L Y D R D L ------I V S Y ----M ----R D -D -L -R E K -L --------(60)
M N F + YD + R
AcrIIA33_Seq M E -L N F V G Q F D N G H D F Y D V E K F V D V N V E T G R L S D E D I I K V Y -D -A -L R N -E H R L R R G K G K
uvig_376839_CDS_0028 H S E -W T E -E K G G E Q E F F ---E A Y -C E -L L R N E -T G E E F -E I (101)
G+ + E + + + E+
AcrIIA33_Seq Y G N L -L S F A E Y G D E D V L T D T T Y W Y -E E D I L P -A Q -D R L E E L
uvig_376839_CDS_0028 5 AcrIIA28 0.54 View Alignment uvig_376839_CDS_0028 M K --K --Q N V K I K -F S -G N L -------Y ----D R D L I V S ---------Y M R D D L R E K L H S (60)
MK + + ++ R + L K S
AcrIIA28 M K T I F T K K Q -T E E L L N D I S I E K Q K E L F N S M H D F R S Q H A K E A R I P G W S D -K Y N K L E K K M L S
uvig_376839_CDS_0028 E W T E E K G G E Q E -F F E A Y -C E -L L R N E T G E E F -E -I (95)
++ E G + L+ F
AcrIIA28 D F E E V T G ---I K -Y D T L E S -E L I W D N L S N K F L Y N S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;