3D Structure for uvig_376506_CDS_0013 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 81.46 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_376506_CDS_0013 1 AcrIIA8 0.74 View Alignment uvig_376506_CDS_0013 M R L E N N S T V W V T -T P H -T A R I R A --Q -E -------E -T V -Y T R L -R A V E I N V Q T D R S -E V (60)
M A + + + + R+ + +
AcrIIA8 M S -I --F ---T -D -M I P -A E L L I N E Y K K G Q S G A K H -D N -Y V -S V G R I M V A I Y K N N S F K N T
uvig_376506_CDS_0013 -D V Q A Y G K T V N E L I K L R S E T P P D I G K D D R L Y L -T Q P A V Q R T V E I H G E A L E D Y G Q G A Y -R V (120)
Y + S GK+ + G
AcrIIA8 G T -V K Y Q D S T H S G -I T M S -K V F I D G K E -Y R I D I -D T Q H Y E V Q D F -D T ---S -G --R Q T -T
uvig_376506_CDS_0013 E A V R S A F I G G I H P K N P T L I E A V R V -K W (147)
+++ ++
AcrIIA8 L I L K ---R -------I ---D L ---Y -G
uvig_376506_CDS_0013 2 AcrVIA3 0.45 View Alignment uvig_376506_CDS_0013 M R L E N N -S T V W V T T P H T A R I R A Q E E T V Y T R L R A V E I -N V Q -T D R S E V D V Q A Y G -K T V N E L (60)
M + + + + V +
AcrVIA3 M -F K E F L E -K C L ---R ------Y -G -------N L -Y I -L E E -T G D R -------K -K V K R I
uvig_376506_CDS_0013 I K L R S E T P P D -I G K D D R L Y L T -Q P A V Q R T V E I H -G E A L E D -Y G Q G A Y R -V E A V R S A F I G G (120)
K + L L + T I L Q Y +
AcrVIA3 S K R H G K ----V -T E A S V L -L F D S G T K R T T --I -N E I Y L -N S --Q -G Y F I I R -D -------
uvig_376506_CDS_0013 I H P K N P T L I E A V R V K W (136)
+E
AcrVIA3 ---Q K R L K L E K --F -K
uvig_376506_CDS_0013 3 AcrIIA22 0.42 View Alignment uvig_376506_CDS_0013 M R L E N N S -T V -W V T T P H T A R I R A Q E E T V Y T R L R A V E I N V Q T D R S E V D V Q A Y G K T V N E L I K (60)
M + T + E+
AcrIIA22 M V -V E E T R D -L A E -T A D C V ----V -------------------------------I E A --
uvig_376506_CDS_0013 L R S E T P P D I G K D D R L Y L T -Q P A -V Q R T V E I H G E A L E -D Y G Q G A Y R V E A V R S A F I G -G -I -(120)
+ + + + + I
AcrIIA22 I L ---V -----------D D -G L R Y R Q ---L S V G I K D E ----N G D I --------I -R -I -V
uvig_376506_CDS_0013 H -P K N P T L I E -A V R V K W (137)
+ V
AcrIIA22 -P -----I S -T -V --L I
uvig_376506_CDS_0013 4 AcrIF9 0.40 View Alignment uvig_376506_CDS_0013 M R L E N N S T V W V T T P H T A R I R A Q E E T V Y T R L R A V E I N V -Q T D R S E -V D V Q A Y G K T V N E L I K (60)
M Y + R E + +++ + +
AcrIF9 M -K --------------------A A -Y I I K E V Q N -I N S -E -R -E G -T Q -I E A T S L S Q A K R
uvig_376506_CDS_0013 L R S E T P P D I G K D D R L Y L -T Q P A V Q R T V E I H G E A L E D Y G Q G A Y R V E A V R S -A F I G G I H P K N (120)
+ S + V R ++ +
AcrIF9 I A S K -------E Q -C --F -H G T V M R I E T -V ---N ----------G ----L -W L -A Y K E D G
uvig_376506_CDS_0013 P T L I E A V R V -K W (132)
AcrIF9 -K R W V D ---C -Q
uvig_376506_CDS_0013 5 AcrIF5 0.39 View Alignment uvig_376506_CDS_0013 M R L E N N S -T V W V T T P H T A R I R A Q E E T -V Y T R L R A V E I N V Q T D R S E V D V Q A Y --G K T V N E L (60)
M V VT R S V++ GK V
AcrIF5 M -S -R -P T V V T V T E -T -P R -------N --------------P G S Y E -V N V E R D G K M V V G R
uvig_376506_CDS_0013 I K L R -S E T P P D I G K D D R L -Y L T -Q -P A V -Q R T V E -I -H -G E -A L E D -Y -G Q G A Y R V E A V R (120)
++ + A Q +
AcrIF5 A R -A G -------S ---D P G -A A A -A K A -M Q -M A M E -W -G -S P N Y V -I L G --S --------
uvig_376506_CDS_0013 S -A -F I G G I H P K N P T L -I E A V R V K W (145)
+ I P + K
AcrIF5 -N -K V L A F I -P --E -Q L R -V ---K M
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;