3D Structure for uvig_375968_CDS_0043 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 83.32 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_375968_CDS_0043 1 AcrIE6 0.72 View Alignment uvig_375968_CDS_0043 M A R S Y E ---T A L A E L E N K R G E L E A L S T I S E E E V -C Y V Y N V D S K S E I V K I L S D E I E T L E R E (60)
M E + + E EL E+ ++ + + E
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L --E I L -S -P M Y T A V M V T Y D L I G K Q L A S R R A E
uvig_375968_CDS_0043 V E Y L T -P L D W S -N D P V A E I -F G G Y E A M N N Y L Y (92)
+ + + + N
AcrIE6 L I E I L E E Q Y P -G H A -A --D L --S --I K -N L C P
uvig_375968_CDS_0043 2 AcrIF2-IC2 0.57 View Alignment uvig_375968_CDS_0043 M -A R S ---Y E T A L A E L E N K R G E L E A L S T I S -----E E E V C Y V -Y N V D ----S K ----S E -(60)
M ++ + + +E + I + E D
AcrIF2-IC2 M A T K T A Q M I A Q Q H K D T V A A C E A A E -A I A I A K D Q V W D G E G Y T K Y T F -D D N S V L -I Q S G -T T
uvig_375968_CDS_0043 I V -K -I L S D E I E T L E R E V E Y L T P L D W S N D P V -A -E I -F G G Y E A M N N Y L Y (109)
D+++++ ++ L + E
AcrIF2-IC2 Q -Y -A M D A D D A D S I K G Y A D W L D D E A R -S -A E A -S -E I E R L L E S V E E --E
uvig_375968_CDS_0043 3 AcrIE1 0.55 View Alignment uvig_375968_CDS_0043 M A ---R ----S Y E T A ----L --------A -E -L -E ----N K R G E L E A L S T -I S E E E V C Y V (60)
M A +E LS E+
AcrIE1 M E K K L S D A Q V A L V A A W R K Y -P D L R E S L E -E -A -A -S I L S L I V F Q A E T L S -D Q A N -E L A N Y
uvig_375968_CDS_0043 Y N V D -S K S E I V K I L S D E I E T L E R E V E Y L T P L D W S --N D P V A E I F G G -Y E A M N N Y L Y (116)
E + + I+ + + + G A +
AcrIE1 I R R -Q -G L E E A E G A C R N I D I M R A K W V E V C G --E V N Q --H G I R V Y G -D --A I D R D V D
uvig_375968_CDS_0043 4 AcrIF23 0.54 View Alignment uvig_375968_CDS_0043 M A ---R S Y E -T -----A ---L --------A E L E ---------------------------(60)
M + +
AcrIF23 M T N F Q T W L -D -S A D I P V Q Q N G Q W I D L E T G I A Y -D P S Y N Y A A N T R R A S L S P R G I D A R A V A K
uvig_375968_CDS_0043 --------N K R -G E L E A L S T I S E E E V C Y V Y N V D S K S E I V K I L S D E I E T L E R E V E -Y L T P L (120)
E + I E E + L +
AcrIF23 T F G G R A L T G T -A R Q K E W A E K I R A -E K V Q Q M -N Q D Q A E M A C D P ----S G L L T A A K F -W I E -
uvig_375968_CDS_0043 D ---W S -N D ------P -V -A E I -F G -G -Y -------------------E A M N N Y L -Y (177)
S ++ A +
AcrIF23 -N R N D S A Q E I A G F V M -Q -Q K A -L L -A -Q H R S A K A A G Q A D K V A K I A A E Y N A L T A R W G F
uvig_375968_CDS_0043 5 AcrIIC4 0.53 View Alignment uvig_375968_CDS_0043 M A -R --S Y E T A L A -E L E N K R G E L E A L S T I S E E E V C Y V Y N V D S K S E I V K -I L -S -D -E I -E (60)
M + + + + LS + + I + + E
AcrIIC4 M K I T S S N ---F A -T -I A T S E N -F A K L S V L P K N H ---------R E P I K -G L -F -K -S -A V E
uvig_375968_CDS_0043 T L E -R E V E Y L T P -----L ---D W S ---N -D P V A E I F G G Y -E -A M N N ---Y L Y (112)
+ + ++ ++E +
AcrIIC4 Q -F S S A R D F F K N E N Y S K E L A E K F N K E A V N -E A V E K L Q K A I -D L A E K Q G I Q -F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;