3D Structure for uvig_374565_CDS_0012 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 91.50 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_374565_CDS_0012 1 AcrIIA26 0.76 View Alignment uvig_374565_CDS_0012 M K L N E T L K T A T I R N L Y N G D E F T -T A F P L ---S P ----Y E L D N I Q -D --------R A T T Y G (60)
MK L + + NG+ + + + N+ +
AcrIIA26 M K --K -L Y I -Q T N Q F A N G E L Q V E N T S Y E L C D T F K E L Y S V A S N L V D E N T L N F V E D N F I E Q N
uvig_374565_CDS_0012 -L H -D Y V I V D L -E G F Y G L V D S R -W C D D V Y S L N D I A E R L E R L E D E D A D K L E -A M A E Y C D D L (120)
+ + V + + E LE LE D
AcrIIA26 Y K D E Y N G V Y E N D G D T G E F V G -Q V -F E N K V T E E Q F K E L L E Q L E I -T ---Y T E -----F D P E
uvig_374565_CDS_0012 D E I E S A W N D S Y F I A D T T G E D Y A Q E L C Y E C G Y M P S K E L P W W I T E H ------I ----D W -K -(180)
+E+ + + ++ +T
AcrIIA26 E E L A K C I A N K N R K -S E F Y G N G L K V I A E Y L E S I S H E D A L A V V T Y Y Y F Y F G F -G Y E D Q L I -S
uvig_374565_CDS_0012 G -V -F -S -E L -S A G G -Y S E -I N -S G V L Y V A R (211)
G E
AcrIIA26 -D -I -K -D -D Q -E D G V K F E H -V E -R S -E T -I
uvig_374565_CDS_0012 2 AcrIIA33 0.57 View Alignment uvig_374565_CDS_0012 M K L N E T L K T A T I -R -N -L Y N G D E F T T A F P L S P Y E L D N I Q D R A T T Y G L H D Y V I V D L E G F Y G (60)
M G T + + + G I +
AcrIIA33 M I K -----W T G -K -S -T -D K G W I R T V -E A E ---T Y Y K L L E T L V D K G Y I G D Y I ---D S D --
uvig_374565_CDS_0012 L V D -S R W C D D V Y S L N D I A E R L E R L E D E D A D K L E A -M -A -E Y C D -D -L D E I E S A W N D S Y F I (120)
++ + E
AcrIIA33 ---S -Q L F H E L ---A Y V ---------------S P A -V -A ----D -L ----E D R L ------
uvig_374565_CDS_0012 A D T T G E D Y A Q E L C Y E C G Y M P S K E L P W W I -T E H I D W K G V F S E L S A G G Y S E -I N S G V L Y V A R (180)
+ E + + + + E++ F+ + AG S V+
AcrIIA33 ---N D E H Q V E Q A L E D L E N F D W N R V ----F -E K L T D Q Q -F Q T A I A G C T S Q A Y -Y Q E F E V I E
uvig_374565_CDS_0012 3 AcrIF13 0.56 View Alignment uvig_374565_CDS_0012 M K L --N E T L -K T A T I R N L Y N G D -E F T T A F P L S P Y E L D N I -Q -D R A T T Y G L H D Y V I V D L -E (60)
MKL +T+ + GD
AcrIF13 M K L L N I K I N E F A V T A N T E -A G D E L Y L -Q L ----------P -H ---------------T P -
uvig_374565_CDS_0012 G F -Y G -L V D S R W C D D V -Y S L N D I A E R L E R L -E D E D A D K L E A -M -A -E Y C D D L D E I E S -A W (120)
+ D + + EY
AcrIF13 D S Q -H S I N H -E P ----L -D D D D F V K ----E V Q E --------I -C -D E Y ------F G K G -D
uvig_374565_CDS_0012 N D S Y F I A D T T G E D Y A Q E L C Y E C G Y M P S K E L P W W I T E H -I -D W -K G V F S E L S A G G -Y S E -I (180)
+ + G E G + A E
AcrIF13 R -T L A R L S Y A G G Q A Y D S Y T E E D G V Y T T N T G D Q -----F -V -E H -S Y -----A D Y Y N V E V -
uvig_374565_CDS_0012 N S G V L Y V A R (189)
+ +
AcrIF13 Y C K A -D -L V
uvig_374565_CDS_0012 4 AcrIC1 0.53 View Alignment uvig_374565_CDS_0012 M K L N E T L K T A T -I R -N L Y N G D E -F --T T -A F P L S P Y E -L D N I Q -D -R A T T -Y G L H D Y V I V (60)
M LK + + + + I + +I
AcrIC1 M N --N -L K K T A I T H D G V F A Y K N T E T V I G S -V --G R N D I V M A I D A -T -H G E F -N D K N F I I Y
uvig_374565_CDS_0012 D -L -E G F Y G L ---V -D S R W C D D V -Y S L N -D I A ----E R L -E R -L -E D E D A D K L E A M A E Y C (120)
G + D + + + A+ E+ Y
AcrIC1 A D -T N G N P I Y L G Y A Y L D D N N D A H I D L A V G A -C N E D D D F D E K -E -I H E M I A E Q M E L A K R Y -
uvig_374565_CDS_0012 D D L -D -E -I -E -S -A W N D S Y F I A D -T T G E D Y A Q E L C Y E C G ---Y -M P S K E L P W --W I T --(180)
+ +A G L P +
AcrIC1 ---Q -E -L -G -D -T -V H G T T R L A F D D D G -Y M T V R L D Q Q -A Y P D -Y R P E N D D K -H I -M W R A
uvig_374565_CDS_0012 ---E H I ----D W K G V F S E L S A ------G G Y S E I N S G V L -Y V A R (223)
+ + + +I
AcrIC1 L A L T A T G K E L E V F W L V E D Y -E D E E V N S -W D F D I A D D W -R -E -L
uvig_374565_CDS_0012 5 AcrIB6 0.50 View Alignment uvig_374565_CDS_0012 M K L N E T L K T A T I R N L Y N G D E F T T A F P L S P Y E L D N I Q D R A T T Y G L H D Y V I V D L E G F Y G L V D (60)
M T L +
AcrIB6 M G -K ----T Y W Y N E -G ----T --D T L ---------------L --------T E K E Y K E L M E
uvig_374565_CDS_0012 S -R W C D D V Y S L N D I A E R L E R L E D E D A D K L E A M A E Y C D D L D -E -I E S A W N D S Y F I A D T T G -(120)
+ L +E +
AcrIB6 -R --------------E A K A L Y E E --------------V Q E -E -----------E K -D F E
uvig_374565_CDS_0012 E D Y A Q E L C Y E C G Y M P S K E L P W W I T -E H -I D W K G V F S E L S A G -G Y S -E I ---N S G V L Y V A -(180)
E + + +
AcrIB6 --------S ---------------S E -K T S F E E F L K T C Y E N E S D F V -L S D N E G N K --L E E
uvig_374565_CDS_0012 R (181)
AcrIB6 W
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;