3D Structure for uvig_371018_CDS_0013 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 95.71 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_371018_CDS_0013 1 AcrIE6 0.74 View Alignment uvig_371018_CDS_0013 M K E L Q P H Q K R V I K E H S E L K L R V D A L N T F I T S N P T F A E L C E G E Q G L L K A Q F K A M K I Y L V A -(60)
M + IK L + + + L+ Q ++ L+
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I E I
uvig_371018_CDS_0013 L D F R I Q L F Q R ----G --D -L (80)
L+
AcrIE6 L E E Q Y P G H A A D L S I -K N L C P
uvig_371018_CDS_0013 2 AcrIE1 0.62 View Alignment uvig_371018_CDS_0013 M K -E L ------Q -P -------H Q K -R V I K -E -H -S -E ----L K L R V D A L N T F I T S -N P T F (60)
M L + + + ++ L+ ++ +
AcrIE1 M E K K L S D A Q V A L V -A A W R K Y P D L R E -S L E E -A -A -S -I L S L I V F Q A E T L S D Q A N -E L A N Y
uvig_371018_CDS_0013 -A E L C E G E Q G L L K A Q F ----K A M K I Y L V -A -L -D -F -R I Q L F Q R ----G -D -L (113)
E + + + D
AcrIE1 I R R Q G L E E A E G A C R N I D I M R A K W V E V C -G -E -V -N -Q H G I R V Y G D A I D -R D V D
uvig_371018_CDS_0013 3 AcrIIC4 0.62 View Alignment uvig_371018_CDS_0013 M K E L Q ---P H Q ---------K R -------V -I -K -E -H S E L K L R V D A L N T F I T S N P T F A E (60)
MK + + + F + E
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I -K -G -L F K S A V E Q F S S A R D F F K N E N Y S K E
uvig_371018_CDS_0013 L C E G E Q G L L K -A Q F K A M K I Y L -V A L -D F R I Q L F Q R G --D L (100)
L E K A I L +
AcrIIC4 L A E ---K F N K E ----A V N E A -V E K -L Q K A I D L A E K Q G I Q F
uvig_371018_CDS_0013 4 AcrIF23 0.59 View Alignment uvig_371018_CDS_0013 M K E -L -----------Q P H Q -K R ---------------V I --------------------(60)
M Q + +
AcrIF23 M T N F Q T W L D S A D I P V Q Q --N G Q -W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K
uvig_371018_CDS_0013 --K ----------------E -H -S -E -L K -L -R V D A L N T F I T S N P -T F A E ---------- (120)
+ P +
AcrIF23 T F G G R A L T G T A R Q K E W A E K -I -R -A -E K -V -Q Q M N Q D Q A E M A C D P S G L L T A A K F W I E N R N
uvig_371018_CDS_0013 L C E G E Q G L L K A Q F K A M ----K -----I -Y L V A L D F R -I -Q -L F Q -R -G ---D -L (174)
E Q KA + +
AcrIF23 D S A Q E I A G F V M Q Q K A L L A Q H -R S A K A -A G Q A D K V A K I -A -A E Y -N -A L T A R W G F
uvig_371018_CDS_0013 5 AcrIF3 0.56 View Alignment uvig_371018_CDS_0013 M -K E L --------Q P H Q K R V I --------------------K ----E -H -S -E -L K L R V D (60)
M + R I L + V
AcrIF3 M S S T I S D R I I S R S V I E A A R F I Q S W E D A D P D N L T E S Q V L A A S -S F A A R L -H -E -G L Q A T V L
uvig_371018_CDS_0013 A L N T F I T S N ------P T F A E -L C ----------E G -------E Q G L L K A Q F -K A M -K ---(120)
++ + E L + A+
AcrIF3 Q R L V D E S N R D E Y R E F Q A W E E A L L N A D G R V T S N P F A D W G W W Y R I A N V M L A T A S Q N V G -V A W
uvig_371018_CDS_0013 --I -Y -L V A L D F R I Q L F Q R --G ----D -L (149)
L Q +
AcrIF3 G S -H -V H G R L M A I F Q D R F -Q Q -H Y E D E E C
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;