3D Structure for uvig_366913_CDS_0043 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 83.56 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_366913_CDS_0043 1 AcrIE6 0.70 View Alignment uvig_366913_CDS_0043 M N K D Y ---M L A A I R Q R I -K D L E Q I Y Y T A C N N K T L S G K Q L S K S G A A V L R S H T K R D I C -I -L (60)
M L L + + +
AcrIE6 M -N -N D T E V L E Q Q I K A F E -L L A D E L K D R L P T L E I L -S P M Y T A V M V T Y D L I ---G K -Q -L -
uvig_366913_CDS_0043 -T -L -I E E -L L V T S T -L V -N I V N D D A I A G F D K L M K E (96)
L+ + D L
AcrIE6 A -S -R R A -E L I E I L E E Q Y P G H A A D L ---S I K N L -C P
uvig_366913_CDS_0043 2 AcrIE1 0.61 View Alignment uvig_366913_CDS_0043 M --N ---K D Y M L A A I R ---------------Q R I K D L E Q I Y Y T A C N N K T L S G K Q L S K S G A (60)
M L+A+ + + + T+ + + + ++G+
AcrIE1 M E K K L S D A Q V A L V A A -W R K Y P D L R E S L E E A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R R Q G L
uvig_366913_CDS_0043 A V L R S H ----T K R D I C I L T L I E E L L V T S T L V N I V N D D A I A G F D K L -M --K -E (112)
+ + + + V D + +
AcrIE1 -E E A E G A C R N I D I M R A K W V E V C G E V N Q H G -I R -V Y G D -------A I D R D -V D
uvig_366913_CDS_0043 3 AcrIIC4 0.61 View Alignment uvig_366913_CDS_0043 M -N K -D Y M L A A I --R ------------------Q R I K D L E Q I Y Y T A C N N K T L S G -K Q L S K (60)
M A I K + +A SK
AcrIIC4 M K I T S S N -F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N --E N -Y S K
uvig_366913_CDS_0043 S G A A V L -R S H T K R D -I -C -I L T -L I E E L L V T S T L V N I V N D -D A I A G F D K L M K -E (114)
A + + ++ +K
AcrIIC4 E L A E K F N K E ----A V -N -E -A V E -K L Q K A I D ---------L -----A E K Q G I Q F
uvig_366913_CDS_0043 4 AcrIF23 0.55 View Alignment uvig_366913_CDS_0043 M -N K D Y M L A A I R Q R I K D L E Q ----------------------------------------(60)
M N L + + Q
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
uvig_366913_CDS_0043 --I Y Y -T A C N -N -K T L -S G -K Q -L S K S G A A V L -R S -H ----T K R D I C I -L T L -I E E -L L - (120)
+ K + + D
AcrIF23 G R A -L T G T A -R -Q K E -W A -E --K I R A E K V Q Q -M N -Q -D Q A E M A C D P S G L -L T A -A K F -W I
uvig_366913_CDS_0043 V T ---S --T L V N I ---V N D ----------------D ----A I -A G F D K L M K ---E (175)
+ S + + D + A L
AcrIF23 E N R N D S A Q E -I A G F V M Q Q -K A L L A Q H R S A K A A G Q A D K V A K I -A A E Y N A L T A R W G F
uvig_366913_CDS_0043 5 AcrIF12 0.55 View Alignment uvig_366913_CDS_0043 M --N ---K D -Y M L A A I R -------------------------------------------(60)
M + +A
AcrIF12 M A Y E K T W H R D -Y A A E S L K R A E T S R W T Q D A N L E W T Q L A L E C A Q V V H L A R Q V G E E L G N E K I I
uvig_366913_CDS_0043 ---Q -R -I K -D L -E Q -I Y Y T A C N N K T L S G K Q L S K S G A A V L R S -H T K R D I C I -L T -L -I E E (120)
+ E + K T +
AcrIF12 G I A D T -V L -S T -I E -A H S Q A T Y -R R -P C Y K R ---------I -T -T ---A Q -T H -L -L -A V
uvig_366913_CDS_0043 L -L V T ---S -T L V N I V -N D -D -A I -A -G F D -K L M K E (156)
L ++ + K
AcrIF12 T L L E R F G S A R R V A -N A V -W Q -L -T D -D E I -D -Q A K A
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;