3D Structure for uvig_365548_CDS_0014 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.81 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_365548_CDS_0014 1 AcrIE6 0.77 View Alignment uvig_365548_CDS_0014 M K -K -E -D L L S L I A K A K T D L A E A K D K M L D D S I ------N D M D T F N D V C D D Y W K K L Q I L K S (60)
M L + I + E+KD+ I M T + + L
AcrIE6 M N N D T -E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I E
uvig_365548_CDS_0014 L -I ---E A -Y -A ---W ---L --E (83)
+ A
AcrIE6 I L E E Q Y P G H -A A D L S -I K N -L C P
uvig_365548_CDS_0014 2 AcrIE1 0.61 View Alignment uvig_365548_CDS_0014 M --K ----K E -D -L -L -S -------L I -------A ----K ---A K T D L ----A -E -A K D K (60)
M K L A L +
AcrIE1 M E K K L S D A Q -V -A -L -V A A W R K Y P D L -R E S L E E A A S I L S L I V F Q A E T L S D Q A -N -E L A N Y
uvig_365548_CDS_0014 M L D D S I N D M D T F N D V C D D Y W K K L Q I -L K -S L I ----E A -Y -A W ----L --E (111)
+ + + D K + +
AcrIE1 I R R Q G L E E A E G A C R N I D I M R A K W V E V C -G E V N Q H G I R -V -Y G D A I D R -D V D
uvig_365548_CDS_0014 3 AcrIIC4 0.61 View Alignment uvig_365548_CDS_0014 M -K -K E D L L S --------L I -------A --------K -A -K T -D L A E A K D K M L D D S I ---(60)
M ++ + A+D +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L F K -S -A V -E Q F S S A R D F F K N E -N Y S K
uvig_365548_CDS_0014 -N D M D T F N D V C D D Y W K K L Q I L K S L I E A Y A W L E (92)
++ + KLQ + L+E
AcrIIC4 E L A E K F N K E A V N E A V E K L Q K A I D L A E K Q G I Q F
uvig_365548_CDS_0014 4 AcrIF23 0.57 View Alignment uvig_365548_CDS_0014 M -K K E -D L L ------S -------L I --A --------------------------------(60)
M L + L
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L -E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
uvig_365548_CDS_0014 -------------------K -----A ----K T D L A E A K D K M L D D S I -------N D M D T F N (120)
+ A L
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E K V Q Q -M N Q D Q A E M A C D P S G L L T A A K F W I E N R N D S A Q E I A
uvig_365548_CDS_0014 D V C D D -Y W K K ----------------L Q I L K S L I E -A Y A W -L --E (165)
+ +
AcrIF23 G F V M -Q Q K A -L L A Q H R S A K A A G Q A D K V A K I A A E Y N A -L T A R -W G F
uvig_365548_CDS_0014 5 AcrIF3 0.55 View Alignment uvig_365548_CDS_0014 M K ---K E D L L S L I --------A --------------------K ----A -K T D L A E A -K D K (60)
M + ++S + L +
AcrIF3 M S S T I S D R I I S R S V I E A A R F I -Q S W E D A D P D N L T E S Q V L A A S S F A A R -L H E G L Q A T V L Q R
uvig_365548_CDS_0014 M L D D S I -------------------------------------N D M D T F N -----D V C D D (120)
+D+S T +
AcrIF3 L V D E S N R D E Y R E F Q A W E E A L L N A D G R V T S N P F A D W G W W Y R I A N V M L A T A S Q N V G V A W G S H
uvig_365548_CDS_0014 Y W -K K -L Q I -L K S L I E A Y A W L --E (144)
+
AcrIF3 V H G -R L M A -I F Q D R F Q Q H Y E D E E C
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;