3D Structure for uvig_364875_CDS_0088 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 88.20 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_364875_CDS_0088 1 AcrIIA21 0.73 View Alignment uvig_364875_CDS_0088 M E -Y D K Y V K I P W F I I L D R ---N I C V G N K L L Y G I I I L L S H -K ---------E G -Y C Y A D N K (60)
M+ IP ++ D ++ + L+Y ++ + Y
AcrIIA21 M D Y D N E N Y L I P K I L L Q D D F Y S S L S A K D I L V Y A V L K D R Q I E A L E K G W I D T D G S I Y L N F K L I
uvig_364875_CDS_0088 Y L G N Y L G V G P R R I S S L L K E L A D N N Y I I M E Y K -H ----K F Q R K I Y I N E E K F T S D L P E D F F (119)
L + L + N I E T + +
AcrIIA21 E L A K M F S C S R T T M I D V M Q R L E E V N L I E R E R V D V F Y G Y S L P Y -K -------T -Y I -N E -V
uvig_364875_CDS_0088 2 AcrIA3 0.53 View Alignment uvig_364875_CDS_0088 M E Y D K Y ----V K --------I -------P W F I I L D R N --------------------I --(60)
M +
AcrIA3 M S F Y I M Y I K V K E M S E Q K Q I S L R S K Q K E L L Q R F F E I A E V D E N G D L C I P L Y D S S G D L T L F K Q
uvig_364875_CDS_0088 C V G N K L L Y G I I I L L S H K E G Y C Y A D N K Y L G N Y L G V G P R R I S S L L K E L A D -N N Y -I I M E Y -K (120)
Y + + + + I
AcrIA3 D S R K Y Q M Y A Y -F R I L R --------------------L ----I -----K K -Q I F F I K V K K -
uvig_364875_CDS_0088 -H K F Q R K I Y I N E E K F T S D L P E D --F F (146)
++ + + +
AcrIA3 V K R D K K F L C M H S N -V I D Q V K S V L E -S
uvig_364875_CDS_0088 3 AcrIE5 0.46 View Alignment uvig_364875_CDS_0088 M E Y D K Y V K I P W F I I L D R N I C V G N K L L Y G I I I L L S H K E G Y C Y A D N K Y L G N Y L G V G P R R I S S (60)
M I II ++
AcrIE5 M -S N D R N G I I N Q I I D Y T ------------------------G ----------T D R D H A E R
uvig_364875_CDS_0088 L L K E L A D N N Y I I M E Y K -H K F Q R K I Y I N E E K F T S D L P E D F F (100)
+ EL I + + I E+ + +
AcrIE5 I Y E E L R A D D R I Y F D D S V G L D R Q G L L I R E D V D L M A V A A E I E
uvig_364875_CDS_0088 4 AcrVA2 0.43 View Alignment uvig_364875_CDS_0088 M E --Y D K Y ---V K ------------------------I --------P W -F -I -I L D ---R (60)
M + K ++ R
AcrVA2 M H H T I A R M N A F N K A F A N A K D C Y K K M Q A W H L L N K P K H A F F P M Q N T P A L D N -G -L A A L Y E L R
uvig_364875_CDS_0088 -----------------------------N ------------------------------ (120)
AcrVA2 G G K E D A H I L S I L S R L Y L Y G A W R N T L G I Y Q L D E E I I K D C K E L P D D T P T S I F L N L P D W C V Y V
uvig_364875_CDS_0088 ---------I -------C V G N K L L Y G I I I L L --S H -K ----------------E G Y C -Y - (180)
G ++Y I+ +H
AcrVA2 D I S S A Q I A T F D D G V A K H I K G F W A I Y D I V E M N G I N H D -V L D F V V D T D T D D N V Y V P Q P F I -L
uvig_364875_CDS_0088 A -D N K Y L G N Y L G V G P R R I S -----S L L K E L A D N --------N -Y -I I M E Y K ---------(240)
+ L G +L+K L+ I
AcrVA2 -S S G Q S V A E V L D Y G A S L F D D D T S N T L I K G L L P Y L L W L C V A E -P -D I T Y K G -L P V S R E E L T
uvig_364875_CDS_0088 ----------H ----K F ------------------------------------------- (300)
AcrVA2 R P K H S I N K K T G A F V T P -S E P F I Y Q I G E R L G S E V R R Y Q S I I D G E Q K R N R P H T K R P H I R R G H
uvig_364875_CDS_0088 ----------Q -R -K -I Y I N E E K F T -S D L P E --D -F F (337)
AcrVA2 W H G Y W Q G T G Q A K -E -F R V R W Q P A V F V -N S -G R V -S -S
uvig_364875_CDS_0088 5 AcrIIA6 0.39 View Alignment uvig_364875_CDS_0088 M -E Y -D K -Y V -K ----I P W F I I L ---D ----------R -----------------N ----(60)
M D
AcrIIA6 M K I N D -D I -K E -L I L E Y M S R Y F K F E N D F Y K L P G I K F T -D A N W Q K F K N G G T D I E K M G A A R V
uvig_364875_CDS_0088 -----------------------I C V G N K L L Y G I I I L L S H K E G Y C Y A D N K Y -L -G -N Y L - (120)
+ L
AcrIIA6 N A M L D C L F D D F E L A M I G K A Q T N Y Y N D N S L K M N M P F Y T Y Y -D M F K K Q ----Q L -L -K -W L K
uvig_364875_CDS_0088 G V -G P R R I S --------S L L K -E -L A D N N Y I I M -E Y -K --H K F -----------Q R -K --(180)
+ + N Y+ ++
AcrIIA6 -N N -R D D V I G G T G R M Y T A S -G N -Y -I A N A Y L E V A L E S S S L G S G S Y M L Q M R F K D Y S K G -Q E
uvig_364875_CDS_0088 I -Y I ----N E -E K -F -T -S D L P E D F F (206)
E E
AcrIIA6 P I P S G R Q N R -L E -W -I -E -N N L E N I R
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;