3D Structure for uvig_363401_CDS_0022 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 90.29 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_363401_CDS_0022 1 AcrIE6 0.74 View Alignment uvig_363401_CDS_0022 M D K R T I E I R A R C E L Y L E Y L G K E Q K I R E Q I N A T N -E P G K I S E L Y R K L E V A Q M G T D S Y A R K I (60)
M + + +++ + + + +++ S +
AcrIE6 M N N ---D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L
uvig_363401_CDS_0022 A D F V V E Q L N -----M D N Q T L I R (82)
++ + EQ +L
AcrIE6 I E I L E E Q Y P G H A A D L S I K N L C P
uvig_363401_CDS_0022 2 AcrIE1 0.66 View Alignment uvig_363401_CDS_0022 M D -K ---R T I E I R -------A -----------R C E L Y L E Y L G K ----E Q K I R E Q I N A T N E (60)
M+ K ++ + L + + + + I +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P -D L R E S L E E A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R R Q -G
uvig_363401_CDS_0022 P G K I S E L Y R K L E V A Q M G T D S Y A R K I A D F V V E Q L N M D N -Q -T L I R (104)
+ + R +++ + + +
AcrIE1 L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D -R -D V D
uvig_363401_CDS_0022 3 AcrIIC4 0.61 View Alignment uvig_363401_CDS_0022 M D -K R T -I -E I R ---A --------------R -C -E -L -Y L E Y L G K E Q K I R E Q I N A T N E P G (60)
M + I + + +R+ N
AcrIIC4 M K I T S S N F A T I A T S E -N F A K L S V L P K N H R E P I -K -G -L F K S A V E Q F S S A R D F F K N E N ---
uvig_363401_CDS_0022 -K I S E L -Y R K L E V -A Q -M G T D S Y A R K I A D F V V E Q L N M D N Q T L I R (104)
EL + + + K+ +++ + +
AcrIIC4 Y -S K E L A E K ----F -N K E A V N E A V E K L Q K -A I D L A E K Q G I Q --F
uvig_363401_CDS_0022 4 AcrIF23 0.57 View Alignment uvig_363401_CDS_0022 M D K R T I ---E ---I R -A -------R C E ---------------------------------(60)
M +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L -E -T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T
uvig_363401_CDS_0022 ----------L Y L E Y L -G K -E Q K I R E Q I N A T N E P G K -I S -E -L Y R K -L E -V A Q M G T D --- (120)
E + K Q N + + +A +
AcrIF23 F G G R A L T G T A R Q K E W A E -K I R A E K V Q Q M N Q D Q -A E -M A -C -D P -S G L -L T A A K F W I E N R N
uvig_363401_CDS_0022 S Y A R K I A D ---F V V ----E ----Q --------L -N ----M D -N Q T -L ---I -R (173)
A IA + +
AcrIF23 D S A Q E I A G F V M Q Q -K A L L A Q H R S A K A A G Q A D K -V A K I A A -E Y -N A L T A R W -G F
uvig_363401_CDS_0022 5 AcrIF3 0.53 View Alignment uvig_363401_CDS_0022 M D -K R T I E -I -------R A ----------------R ----C -E -L Y L E Y L G K E -Q K I R E Q (60)
M + I + +
AcrIF3 M S S T I S D R I I S R S V I E A A R F I Q S W E D A D P D N L T E S Q V L A A -S -S F A A R L H E G L Q A T V L Q R
uvig_363401_CDS_0022 I N A T N E P ---G K I S E L Y R K L E V -A Q -M G T D ----------S Y A R K I A -D F V V -E ------(120)
+ + + L T A +
AcrIF3 L V D E S N R D E Y R E F Q A W E E A L L N A D -G R V T S N P F A D W G W W Y R I A N V M -L A T A -S Q N V G V A W
uvig_363401_CDS_0022 --Q --------L N M D N Q T -L --I -R (145)
+ Q+
AcrIF3 G S H V H G R L M A I F Q D R F Q Q H Y E D E E C
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;