3D Structure for uvig_351737_CDS_0004 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.87 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_351737_CDS_0004 1 AcrIC5 0.75 View Alignment uvig_351737_CDS_0004 M -K V M L N G Y E V S F D A C V N M M D D E L R E E I H E E M S P C T E Q E F L D E Y V K R F A E K Y N E -E F -A I (60)
M KV LNG + FDA VN MD ELREE+H ++QEFLD YV A K EF ++
AcrIC5 M S K V T L N G Q Q I D F D A A V N L M D A E L R E E L H S A Q E W T N D Q E F L D A Y V Q A H A A K F D G E E F Q V A
uvig_351737_CDS_0004 2 AcrIE3 0.64 View Alignment uvig_351737_CDS_0004 M K V M L N G Y E V S F D A C V N M M D D E L R E E I H E E -M --------S P -C ---T E Q E F L D E Y V K -R (60)
MK+ DEL I + +DE
AcrIE3 M K I T N D T T T Y E V A E L M G S E A D E L D G R I M M G L L S R E C V V D T D -D L S E D Q W L A L I D E S Q -K V
uvig_351737_CDS_0004 F A E K Y N E E F A I (71)
E E +
AcrIE3 R R E -Q F E S D E A
uvig_351737_CDS_0004 3 AcrIE4 0.62 View Alignment uvig_351737_CDS_0004 M K V M L N G Y E V S F D A C V N -M M D D E L R E E I H E E M ---S P C T E Q ----E F L D E Y V K R F A E K Y N (60)
M + + ++ E M TE +E V +E
AcrIE4 M S -T ----Q Y T Y E ----Q -I A E D F -R L W G E Y M D P N A E M T E E E F Q A L S T E E K V A M Q V E A F G
uvig_351737_CDS_0004 E E F A I (65)
+
AcrIE4 A -E -A
uvig_351737_CDS_0004 4 AcrIB6 0.61 View Alignment uvig_351737_CDS_0004 M -K -V -M L N G -Y E -V S F D ---A C V N M -M D D E L R E E I H E E M S P ------C T E Q ----E F L D (60)
M K G ++ L EE+ EE +
AcrIB6 M G K T Y W Y N E G T D T L L T E K E Y K E L M E -R E A K A L Y E E V Q E E E K D F E S S E K T S F E E F L K T C Y -
uvig_351737_CDS_0004 -E Y V K -R -F A E K Y N E E F A -I (80)
+
AcrIB6 E N E S -D F V L S D N E G N K L E E W
uvig_351737_CDS_0004 5 AcrIF19 0.59 View Alignment uvig_351737_CDS_0004 M -K V -M --L N G -Y E -V -----------S -F D A -------C V N -M M -D D E L R E ------E I (60)
M + + + +
AcrIF19 M K P L H T M N Y D N N Q M S L V Y E S Y D E Y G F E Y S V -K L K I S V R D Y -R G -I D V -S A F N A F P E W E D T
uvig_351737_CDS_0004 H E E M -S P C T E Q ----E F L -D -E -Y V -K -R F A E K Y N E E -F -A I (102)
+ Y F+ I
AcrIF19 L R M R D R V M S V E E I E N A M -I -S -R Y -K -S L F I A P P D C T Y E F D I
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;